| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5888 |
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| Symbol | ispG |
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| ID | 8330095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6931365 |
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| End bp | 6932522 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644946320 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003103543 |
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| Protein GI | 256379883 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG GCGTCATGCT CGGTATGCCT GCGCTGCCGC CTCCCGTCCT GTCCGAGCGG
CGCAGGACCC GCCAGCTCAA GGTCGGGTCG GTCGGCGTCG GCAGCGAGTC CCCGGTGTCG
GTGCAGTCCA TGACCACGAC GGTCACCGCG GACGTCAACG CCACCCTCCA GCAGATCGCG
GAGCTCACCG CGTCCGGCTG CGACATCGTC CGGGTCGCCT GCCCCACGCA GGACGACGCC
GACGCGCTCG CCGCCATCGC GAAGAAGTCC CAGATCCCGG TGATCGCGGA CATCCACTTC
CAGCCGAAGT ACGTGTTCGC CGCCATCGAG GCGGGCTGCG CGGCGGTCCG GGTCAACCCC
GGCAACATCA AGAAGTTCGA CGACAAGGTC AAGGAGATCG CCGCGGCGGC CCGCGACCAC
AACACCCCCA TCCGCATCGG CGTCAACGCG GGCTCGCTCG ACCCGCGCCT GATGGCCAAG
CACGGCAAGG CCACCCCCGA GGCCCTCGCC GAGTCGGCGC TGTGGGAGGC CTCGCTCTTC
GCCGAGCACG ACTTCCACGA CCTGAAGATC TCCGTCAAGC ACAACGACCC CGTGGTCATG
GTGCGCGCCT ACGAGATCCT CGCCGAGCAG TGCGACTACC CGCTGCACCT GGGCGTCACC
GAGGCGGGCC CCGCGTTCCA GGGCACGATC AAGTCCGCCG TGGCCTTCGG CGCGCTGCTG
CGCCAGGGCA TCGGCGACAC GATCCGGGTC TCCCTGTCGG CCCCGCCGGT GGAGGAGGTC
AAGGTCGGCA ACCAGATCCT GCAGTCGCTG AACCTGCGTC CCCGCAAGCT GGAGATCGTG
TCCTGCCCGT CCTGCGGTCG GGCCCAGGTG GACGTCTACA CCCTCGCCGA GCAGGTCACC
GCCGGTCTGG AGGGCATGGA GGTGCCGCTG CGCGTCGCCG TCATGGGCTG CGTCGTCAAC
GGCCCCGGCG AGGCCCGCGA GGCCGACCTG GGCGTGGCCT CCGGCAACGG CAAGGGCCAG
ATCTTCGTCA AGGGCAAGGT CATCAAGACC GTGCCCGAGC ACCTGATCGT GGAGACCCTG
ATCGAAGAGG CGATGCGCAT CGCCGAGGAG GTCGGCGAGA CCGAGGCCTC CGGCGAGCCC
GTCGTCACGG TCGGCTGA
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| Protein sequence | MTDGVMLGMP ALPPPVLSER RRTRQLKVGS VGVGSESPVS VQSMTTTVTA DVNATLQQIA
ELTASGCDIV RVACPTQDDA DALAAIAKKS QIPVIADIHF QPKYVFAAIE AGCAAVRVNP
GNIKKFDDKV KEIAAAARDH NTPIRIGVNA GSLDPRLMAK HGKATPEALA ESALWEASLF
AEHDFHDLKI SVKHNDPVVM VRAYEILAEQ CDYPLHLGVT EAGPAFQGTI KSAVAFGALL
RQGIGDTIRV SLSAPPVEEV KVGNQILQSL NLRPRKLEIV SCPSCGRAQV DVYTLAEQVT
AGLEGMEVPL RVAVMGCVVN GPGEAREADL GVASGNGKGQ IFVKGKVIKT VPEHLIVETL
IEEAMRIAEE VGETEASGEP VVTVG
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