Gene Amir_5884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5884 
Symbol 
ID8330091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6926997 
End bp6927704 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content76% 
IMG OID644946316 
Producthypothetical protein 
Protein accessionYP_003103539 
Protein GI256379879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGACA CGCCCGCCAC CGCGGTCCTG CTGCACAGCC CGTTCCTGGG ACCCGCCAGC 
CTCGCCCCGC TCGCCGACGC GCTCGCCGCG CTCGGCAGGC CGGTGCTGCC GCTGGACGTG 
CGGGTGACGG TCAACGCCGC ACCCGTGCAC CAGCGGATCA TCGGCGGCCT CACCGACGCG 
GTCGAGGACT CGGGGGTGAG CGGCGACCTG GTCCTGATCG GGCACAGCGG CGCCGGTCCC 
CTGCTCCCCG CGTTCGCCGA GGCCCTCGAG GAAGCCCCCG TCACCGGTCT GGTCTACCTC 
GACTCCGACC TGCCCACACC CGGCCGCAGC TGGCGCGACA CCGCGCCCGC CGAGCTGTTC 
TCCGCGCTGA AGGCCGCCTC GCGGGGCGGG CTGCTCCAGC GCTGGGACCG CTGGTTCGGC 
CCGGACGGGA TCGCGGACCT GGTGTCCGAC GCGGACCTGC TGGCCGAGAT CACCGCCGAG 
GCCCCCGAGG TTCCGCTGGC GTTCCTGAAG GAGCCGCACC CGACGATCGA GTGGACCGGC 
CCGCAGGCGC TGCTGCGGCT GAGCCCCGCC TACGACGAGG CGTGCGCCCA GGCCGCCGCG 
CTGGGCTGGC CGGTCCGCGA GCTGGACCTG CACCACCTGG CCGCCGCCAC CGACCCGGAG 
CCGGTGGCGC TGGCGCTGGC GGACCTGCTG GACCGGTTGG GCCGCTGA
 
Protein sequence
MVDTPATAVL LHSPFLGPAS LAPLADALAA LGRPVLPLDV RVTVNAAPVH QRIIGGLTDA 
VEDSGVSGDL VLIGHSGAGP LLPAFAEALE EAPVTGLVYL DSDLPTPGRS WRDTAPAELF 
SALKAASRGG LLQRWDRWFG PDGIADLVSD ADLLAEITAE APEVPLAFLK EPHPTIEWTG 
PQALLRLSPA YDEACAQAAA LGWPVRELDL HHLAAATDPE PVALALADLL DRLGR