Gene Amir_5872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5872 
Symbol 
ID8330079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6912027 
End bp6912692 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID644946304 
Productstreptogramin A acetyl transferase 
Protein accessionYP_003103527 
Protein GI256379867 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTTC CCGACCCGAA CCAGCTGCAC CCGATGGCCG ATCACCCGAG GGTGGTGCTG 
CTCAAGCCAC TGGTCGACGC ACCGAACATC GAGGTGGGCG ACTACACGTA CTACGACGAC
CCCGAGCGCG CGACCGAGTT CCAGACCCGC AACGTGCTGT ACTCCTACGG CCAGGAACGC
CTGGTCATCG GCAAGTACTG CGCTCTGGGC ACGGGCACGA CGTTCATCAT GGCCGGCGCG
AACCACCTGA CCAAGGGCCC GTCCACGTTC CCGTTCACGA TCTTCGGCGG CGCCTGGGCG
GAGAAGACCG CCGACATCAT GGCCGCCGCC CCCAGCAAGG GCGACACGGT CGTGGGCAAC
GACGTGTGGT TCGGCTGCGG CGCCACCGTC ATGCCGGGCG TGACCATCGG TGACGGCGCG
ATCATCGCGA CCGGCGCCGT GGTGACCTCG AACGTCGCCC CGTACACCGT CGTCGGGGGC
AACCCCGCGC AGGCGGTGCG GCAGCGCTAC CCCGACGACA AGATCGAGCT GCTGCTGCGC
GCGGCGTGGT GGGACTGGCC CGTCGAGCTG GTCACCGAGC ACGTGCGCGA GATCATGGCG
GGCAAGGTCA AGCAGCTCGC CGACATCGCC GAGGAGAACG GGCTGCTCAA GCCCAAGCCC
CGCTAG
 
Protein sequence
MTVPDPNQLH PMADHPRVVL LKPLVDAPNI EVGDYTYYDD PERATEFQTR NVLYSYGQER 
LVIGKYCALG TGTTFIMAGA NHLTKGPSTF PFTIFGGAWA EKTADIMAAA PSKGDTVVGN
DVWFGCGATV MPGVTIGDGA IIATGAVVTS NVAPYTVVGG NPAQAVRQRY PDDKIELLLR
AAWWDWPVEL VTEHVREIMA GKVKQLADIA EENGLLKPKP R