Gene Amir_5869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5869 
Symbol 
ID8330076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6909074 
End bp6909817 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content75% 
IMG OID644946301 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003103524 
Protein GI256379864 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTG CCGTTTTTCT CAGCGTTCTC GCGGTGCTGT GCGGAGGGGG CGTCGCGACC 
GCGGCGGCGG AACCCAGAGT CGTCGGCGGG ACGCGCGCGT CCATCGCCGA GCACCCGTGG
GTGGTGTTCC TGGCGGGCAC GACCGGGAGC CAGTTCTGCG GCGGGACGCT CGTCGCGCCG
ACCAAGGTGG TCACCGCCGC GCACTGCGTC GCGGGCACCG CCCCGGAGCG GCTCGTCGTC
GTCGCGGGGC GCGAGGACAA GCGCACCCAG GCGGGTGAGA CGCTGCGGGT GGCCCGGATC
TGGAAGCACC CGTTCTACTC GTCGGCCGAG CAGGGCAGCG ACGTCGCCGT GCTCACGCTG
GCCAGGCCGG TCGCGAACCG GGTGCTGCCG CTCGCGTCCG CCGACCCGGC GCCGGGGACG
GTGGCGAAGG TCCTCGGCTG GGGCCGCACC GCCGAGATCG GGGCCGCCTC CCAGGTGCTG
CTGGGCGCGA ACGTGCCGGT CATGTCCAAC CAGGACTGCA CCGCCGACTA CGCCCGGTTC
GACCCGGCTG CCATGGTCTG CGCGGGCTAC CCGCGCGGCG GCATCGACAC CTGCCAGGGC
GACTCCGGCG GCCCGCTGGT CGCGAACGGC GCGCTGATCG GCGTCACCTC GTGGGGCGAG
GGCTGCGCGC GGCCCGGCCA GCCCGGCGTG TACTCGCGGA TCACCGCCTA CCGCGCGCTG
ATCGACCAGC AGCTCAAGGG CTGA
 
Protein sequence
MRLAVFLSVL AVLCGGGVAT AAAEPRVVGG TRASIAEHPW VVFLAGTTGS QFCGGTLVAP 
TKVVTAAHCV AGTAPERLVV VAGREDKRTQ AGETLRVARI WKHPFYSSAE QGSDVAVLTL
ARPVANRVLP LASADPAPGT VAKVLGWGRT AEIGAASQVL LGANVPVMSN QDCTADYARF
DPAAMVCAGY PRGGIDTCQG DSGGPLVANG ALIGVTSWGE GCARPGQPGV YSRITAYRAL
IDQQLKG