Gene Amir_5868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5868 
Symbol 
ID8330075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6908247 
End bp6908978 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content73% 
IMG OID644946300 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003103523 
Protein GI256379863 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGG CGATGGCGCT GGCACTGCTG CTCACCGGCG TGGCGGTGGC GCCGCCCGCC 
GGGGCCGACC CGAGGATCGT CGGCGGCGTG GTCGTGGACG CCCCGAACCC CTATCCGTGG
GTGGTGGCGC TGGCCGACCA GAACGGCAGG CAGTTCTGCG GCGGCGCGAT CGTCAGCCGG
TACCAGGTGG TGACCGCCGC GCACTGCGTC AACGGGCTCA CCGGGCGCGA CGTGCTGGTG
GTGGCGGGCA GGCTGGACGT GACCAAGCCC GGCGGCACGG TCCACCCGGT GTCCCAGGTG
TACGTCCACT CCGCCTACCG GTCGGCGACC AGCGGCGCGG ACATCGCGTA CCTGCTGACG
TCCACGCCGA TGCCGTACGA GCCGATCGCA CTGGCCAAGC CGTCCGAGAC CGGGCTGTAC
CGGGCGGGCA TCACCGGCAC CGCGTTCGGC TGGGGCCGCA CCTCGGAGAG CGGGAGCACC
TCGCCGGTGC TGCGGAAGGT GTCCGTGCCG CTCCAGACCA ACGAGGTGTG CGCCGCCGCG
TACCCCGGCT ACTACCAGTC GTCGTCGATG TTCTGCGCCG GGCTGCCCAA CGGCGGCAAG
GACGCCTGCC AGGGCGACTC GGGCGGGCCG TTCATCATCG CGGGCAGGCT CGCCGGGCTG
GTGTCCTGGG GCGTCGGCTG CGCCCGGCCG GAGTACCCCG GCGTGTACAC CCGCGTCGGC
GTCTACACCT GA
 
Protein sequence
MRVAMALALL LTGVAVAPPA GADPRIVGGV VVDAPNPYPW VVALADQNGR QFCGGAIVSR 
YQVVTAAHCV NGLTGRDVLV VAGRLDVTKP GGTVHPVSQV YVHSAYRSAT SGADIAYLLT
STPMPYEPIA LAKPSETGLY RAGITGTAFG WGRTSESGST SPVLRKVSVP LQTNEVCAAA
YPGYYQSSSM FCAGLPNGGK DACQGDSGGP FIIAGRLAGL VSWGVGCARP EYPGVYTRVG
VYT