Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5866 |
Symbol | |
ID | 8330073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6906696 |
End bp | 6907445 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644946298 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_003103521 |
Protein GI | 256379861 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5640] Secreted trypsin-like serine protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCA GCCCCCGCTT AGTCGCCGCC CTCGCCCTGG TCGCGGTCCA GCTCGCCTCC CAGCTCGTCG CCGCACCCGC CGCGCTCGCC GTCGTCGGGG GCTCCGTCGC CGGTCGCGCG CCGTGGGTGG CCGCCCTGCT CGACGCGCGC GGCTCCCAGT TCTGCGGCGG CGCCCTCATC GCCCCCGACC GGGTCGTGAC CGCCGCCCAC TGCACCCAGG AGCGCGGCCT GCTCGGACCG CGCGACCGCG CGCCCCGGCA GCTCACCGTC GTGCTCGACC GGCACGACCT GCGCACGAGA AGCGGGGTGC GGGTCGGCGT CTCCGGGATC TGGCGGCACC CGGCGTTCAC CGACGTGGGA CGCGGCGACG ACCTGGCCGT GCTCCAGCTC GACGGCCCGG TCGCGTTCGA GCCCGTCCGG GTCGGCGACG CCGTCGCGGG CCGCACCGCC ACCGCCTACG GCTGGGGCCG CACCGCCGAG AGCGGCCCGG TGTCCTCGCT GCTGCGCCAG GTCGACGTGC CGATCCGCGC GGACCACGAC TGCGCCGCCG CGCTCGCCGG CTACCGCGCC GACGCGATGC TGTGCGCGGG CTTCCCGGAC GGCGGCAGGG ACGCCTGCAC GGGCGACTCC GGCGGCCCGC TGGTCTCCGA CGGCCTGCTC GTCGGCGTCG TCTCCTACGG CCGGGGCTGC GCCCGCGCGG GCCAGCCCGG CGCCTACACC CGGCTCGCCC ACTACCGCGA CCGGCTCTGA
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Protein sequence | MRISPRLVAA LALVAVQLAS QLVAAPAALA VVGGSVAGRA PWVAALLDAR GSQFCGGALI APDRVVTAAH CTQERGLLGP RDRAPRQLTV VLDRHDLRTR SGVRVGVSGI WRHPAFTDVG RGDDLAVLQL DGPVAFEPVR VGDAVAGRTA TAYGWGRTAE SGPVSSLLRQ VDVPIRADHD CAAALAGYRA DAMLCAGFPD GGRDACTGDS GGPLVSDGLL VGVVSYGRGC ARAGQPGAYT RLAHYRDRL
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