Gene Amir_5856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5856 
Symbol 
ID8330063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6895160 
End bp6896419 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content77% 
IMG OID644946289 
Productcobalamin (vitamin B12) biosynthesis CbiG protein 
Protein accessionYP_003103512 
Protein GI256379852 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.302662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGGCT TGTTCGCGTC GACCGAGCGC GGCAGGGCGC AGGCCAAGGA GCTCGCGGCC 
TTCCTCGGCC CGGACGCCGT CGTCCCCGAC GGCCCCGTCG CGCCCGCGCT GCGCCGGATG
TGGCCGGTGC TGGGCAGCGC CGTGCTCTTC GAGGGCAGCG AGACCGCCAT CCGCCTCGTG
GCCCCCCTGC TGCGCGACGA GCGCTCCGAC CCCGGCGTGG TGTGCGTCGA CGGCGCGTTC
GCCATCGCCC TCCTCGGCGG CGCGGACGCG CTCGCCCAGC GGGTCGCCGA CGTGCTCGGC
CGCACCGCCG TCACCACCGC CCCGCCCACC GCGTCCCCCC TGGACGAGCT GCTCGAACTG
CTCGACGCCA CCGCCGAGGG CGACGCGGTG GCGTGCGGCG AGGCGATGCG CGCGGGCGAG
CCGGTCGCGC TCGCCAACCC GCTCGGCTTC CCGCTGCCCG CGCTGCCGGA CAACGTCCTG
CCCGCCGGTC ACGAGGCCGC GTGGACGGTG CTGCTGGACG ACCGGGTGCC CAGGACCGAG
CTGGGCGACC ACGTGGTCCG GGTGATCCCC AGGACGCTCG TGATCGGCAT CGGCGCGAGC
GCGGGCGTCA CGTCCACCGA CGTCTCCGGC GCGCTCGCCA AGCTCGCCGC CGACGGCAGG
CTGGACCTGC GGGCCGTGCG CGCGTTCGCC ACGCTCGACC GCAAGACCGA GGAGCCCGGC
ATCGTCGACG CGGTCGAGGA CTGGGGCTTC TGGCACGGCT CCACCACCAC GCCCCTGCTC
GGCTACCCCG GCGAGGAGCT GGCCGTCATC CCGGTGCCGA ACCCGGTGGA GCTGGCCATC
GGCATCCCCA GCGTCGCCGA GGCCGCCGCG CTGCGCGGCG CGGCCGAGCT GTCCGCCGGT
GGCCGGGTGG AGATCGCCGC CGAGAAGGTC AAGGGCGCGC GGGCCACCGT CGCCGCCGCC
CGCGTCCTGC CCAGGGGCAG GCTGGCGCTC ATCGGCCTCG GGCCGGGCGG CGCGGACGAC
CGCACCCCGC GCGCGGAGGC CGAGCTGCGC CGCGCGTCCG TGGTGGTCGG GCCGCCGGAG
TGCGTCGACC AGGTCAGGCA CCTGCTGCGG CCGGGCACGT CGGTGCGCGC GGACGGCGCG
GTGCGGCTGG CGGAGCAGGG CGTCGCGGTG GCGCTGGTGG CGCCGGACGC GGGACCGGTT
GTTGCCGGGC CGGTACACGC CGATGTCGTT CGTGTGACCG GAGTCACTGG TCAATTGTGA
 
Protein sequence
MIGLFASTER GRAQAKELAA FLGPDAVVPD GPVAPALRRM WPVLGSAVLF EGSETAIRLV 
APLLRDERSD PGVVCVDGAF AIALLGGADA LAQRVADVLG RTAVTTAPPT ASPLDELLEL
LDATAEGDAV ACGEAMRAGE PVALANPLGF PLPALPDNVL PAGHEAAWTV LLDDRVPRTE
LGDHVVRVIP RTLVIGIGAS AGVTSTDVSG ALAKLAADGR LDLRAVRAFA TLDRKTEEPG
IVDAVEDWGF WHGSTTTPLL GYPGEELAVI PVPNPVELAI GIPSVAEAAA LRGAAELSAG
GRVEIAAEKV KGARATVAAA RVLPRGRLAL IGLGPGGADD RTPRAEAELR RASVVVGPPE
CVDQVRHLLR PGTSVRADGA VRLAEQGVAV ALVAPDAGPV VAGPVHADVV RVTGVTGQL