| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5852 |
|---|
| Symbol | |
|---|
| ID | 8330059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 6888887 |
|---|
| End bp | 6890050 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644946285 |
|---|
| Product | protein of unknown function RIO1 |
|---|
| Protein accession | YP_003103508 |
|---|
| Protein GI | 256379848 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.445195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGAGC ACGCGATCAC CACGAACGCA CTGCACGAAC TCAAGATCAA CTTCAATCAC
GGCGGTCGGG TCGACGACGC CGCCTGTGCC GATACCCGCT ACGGCGGTAC CGATGATGTC
GACACCGACG ACACCGACAC CGATGCCGAC GACTACGCAG GTCACGCCGA TGCCGACGGC
TACGACGCCG ACGGTCACGA CGAGGGTGAC GGCGACGACA GCGACGCCGA CCCGTACGGC
CGCTGGTCCG ACTACGAGCT GGACGACTAC GGCCCCCGCG AGGTCAGGAC TCGGGTCCGG
GTCGTGCGGG ACGACGAGGA GAACGTCCGG CGCGGCAGGC TCACCCAGGA GGCCAAGAAG
CGGCTCGGCG AGTCGCGGCA GCTCACCGGA CCCGAGGACG GCGACCGGTG GTCCACCTGG
GGCAGCGCCG ACCAGGGGCC CGCGCCGCAC CCGGCGTGGC TGGTCACCGA CCTCGGGGCG
GTCGACCGGG AGCTCGGGCT GATCAAGTCC GGCAAGGAGG CGGACGTCTC GCTGCTGGAG
CGCGCCACGC CCGAGCGGTC CTGCCTGCTG GCCGCGAAGC GGTACCGGGA CAACGACCAC
CGGCTGTTCC ACCGGGACGC GGGTTACCTG GAGGGCCGTC GGGAGCGGCG GAGCCGGGAG
GCCCGCGCGA TGTCCCGGCG CAGCGCGTTC GGGCGGAACC TGATCGCCGA GCGGTGGGCG
GTGGCCGAGT TCGCGGCGCT CGGCGCGCTG TGGCAGCGCG GCGTGCCGGT GCCCTACCCG
GTGCAGCGCG ACGGCACCGA GGTGCTGATG GAGTTCATCG GCGACGGCGC CCAGGCCGCG
CCCCGGCTCG CCCAGACCAG GCCCGAGCCG GACGCGCTGG TGGACCTGTG GCGGCAGCTC
GGGTCGGCGC TGACGGGGAT GGCCGCCGCC GGGTACGCGC ACGGCGACCT GTCGCCGTAC
AACCTGGTGG TGCACGACGA CCGGCTCGTG GTGATCGACC TGCCGCAGCT GGTCGACCTG
GTCGCCAACC CGCGCGGGGC CGAGTTCCTG GCGCGCGACG TGCGGGTGGT GGCCGACTGG
TTCACCGCGC GCGGCCTGCC CGCCGAGCTG GCCGACCCGG CCGAGCTGAC CGCCGACCTC
CTCCGGGAGG CCGGACTGGG GTGA
|
|---|
| Protein sequence | MREHAITTNA LHELKINFNH GGRVDDAACA DTRYGGTDDV DTDDTDTDAD DYAGHADADG
YDADGHDEGD GDDSDADPYG RWSDYELDDY GPREVRTRVR VVRDDEENVR RGRLTQEAKK
RLGESRQLTG PEDGDRWSTW GSADQGPAPH PAWLVTDLGA VDRELGLIKS GKEADVSLLE
RATPERSCLL AAKRYRDNDH RLFHRDAGYL EGRRERRSRE ARAMSRRSAF GRNLIAERWA
VAEFAALGAL WQRGVPVPYP VQRDGTEVLM EFIGDGAQAA PRLAQTRPEP DALVDLWRQL
GSALTGMAAA GYAHGDLSPY NLVVHDDRLV VIDLPQLVDL VANPRGAEFL ARDVRVVADW
FTARGLPAEL ADPAELTADL LREAGLG
|
|---|
| |