| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5823 |
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| Symbol | |
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| ID | 8330030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6859588 |
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| End bp | 6861831 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644946257 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003103480 |
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| Protein GI | 256379820 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA TCGAGGTCCA CGAGACTTCA GCCGTGATCG ACAACGGTCG GTTCGGCACC
CGCACCATCC GGTTCGAGAC CGGTCACCTG GCCCGCCAGG CCGCAGGCAG CGTCGTCGCG
TACCTGGACG ACGAGACCAT GCTGCTCTCG GCGACCACCG CCTCCAAGGC GCCGAAGGAG
CACTTCGACT TCTTCCCGCT GACGGTGGAC GTCGAGGAGC GCATGTACGC CGCGGGTCGC
ATCCCCGGCT CGTTCTTCCG CCGCGAGGGC CGTCCGTCCA CGGACGCGAT CCTGACCTGC
CGCCTGATCG ACCGCCCGCT GCGCCCGTCC TTCGTGGACG GCCTGCGCAA CGAGATCCAG
GTCGTCATCA CGGTCATGAG CCTGAACCCG GCCGACCTGT ACGACGTCGT GGCGATCAAC
GCCGCGTCCG CGTCGACGCA GCTCGCCGGC CTGCCCTTCT CCGGCCCCAT CGGCGGCGTC
CGCGTGGCGC TGATCGAGGG CCAGTGGGTC GCGTTCCCGA CCCACGAGCA GCTGGAGAAC
GCCGTCTTCG ACATGGTCGT CGCCGGCCGC GTCGTGGGCG ACGACGTCGC GATCATGATG
GTCGAGGCCG AGGCCACCGA GAAGGTCATC GACCTGATCG GCGAGGGCGC CCAGGCCCCG
ACCGAGGAGG TCGTGGCCGC CGGTCTCGAG GCCTCCAAGC CGTTCATCAA GGTGCTGTGC
GAGGCGCAGG CCCAGCTCGC GCAGGTCGCC GCCAAGGCGA CCGGCGAGTT CCCGACCTTC
CCGGCCTACC AGGCTGACGC GTTCGAGGCC GTCGAGGCCG CGGGCGCGAG CGACCTGGCC
CAGGCGCTGA CCATCGCGGG CAAGCAGGAG CGCGAGGGTC GCATCGACGA GGTCAAGGCG
TCGGTGCTGG AGAAGCTGGC CGCGCAGTTC GAGGGCCGCG AGAAGGAGGT CGGCGCCGCG
TTCCGCTCGC TGACCAAGAA GCTCGTGCGC CAGCGCATCC TGCGCGACAA GGTCCGCATC
GACGGCCGCG GCCTGACCGA CATCCGGTCG CTCGGCGCCG AGGTCGCGAT CATCCCCAGG
ACGCACGGCT CCGCCCTGTT CGAGCGCGGC GAGACCCAGA TCCTGGGCGT CACCACGCTG
AACATGCTCC GCATGGAGCA GCAGATCGAC TCGCTCTCCC CGGAGACGCA CAAGCGGTAC
CTGCACCACT ACAACTTCCC GCCCTACTCC ACCGGTGAGA CCGGTCGGGT CGGCTCGCCC
AAGCGCCGCG AGATCGGCCA CGGCGCGCTG GCGGAGCGGG CGCTGATGCC GGTGCTGCCC
AAGCGCGACG AGTTCCCGTA CGCGATCCGC CAGGTCTCCG AGGCGCTGGG GTCCAACGGC
TCCACGTCCA TGGGCTCGGT CTGCGCGTCC ACGATGTCGC TGCTCAACGC GGGCGTCCCG
CTGAAGGCGC CGGTGTCGGG CATCGCCATG GGCCTGGTCT CCGACGAGGT CGACGGCAAG
ACCGAGTACG TCGCGCTGAC CGACATCCTC GGCGCCGAGG ACGCGTTCGG CGACATGGAC
TTCAAGGTCG CGGGCACCAA GCAGTTCGTG ACCGCGCTCC AGCTCGACAC CAAGCTCGAC
GGCATCCCGT CCGAGGTCCT GGCGTCGGCG CTGTCCCAGG CCCGCGACGC GCGCCTGGCG
ATCCTGGAGG TCATGGCCGA GGCCATCGAC GTCCCGGACG AGATGAGCCC GTTCGCGCCG
CGCGTCACGT CGGTCAAGAT CCCGACCGAC AAGATCGGCG AGGTCATCGG GCCCAAGGGC
AAGATGATCA ACTCGATCAC CGAGCAGACC GGCGCCGACA TCTCCATCGA GGACGACGGC
ACGATCTACG TCGGTGCGGC GGACGGCCCG TCCGCGGAGG CCGCCATCGG CCTGATCAAC
GCCATCGCGA ACCCGCAGCT GCCGAAGGTC GGCGAGCGCT TCCTGGGCAC CGTGGTCAAG
ACCGCGGCGT TCGGCGCGTT CGTCTCCCTG CTGCCGGGCA AGGACGGCCT GATCCACATC
TCCAAGCTGG GCAACGGCAA GCGCATCGGC AAGGTCGAGG ACGTCGTCAA GGTCGGCGAC
AAGCTCCGCG TCGAGATCGC GGACATCGAC CAGCGCGGCA AGATCAGCCT GGTGCTGGTG
TCCGAGGAGG AGGGGGCCGA CAAGGCCGCC GCCCCGGCCG CCGAGACCGC TGAGACCTCG
GCTCCGGAGT CCTCGGACCA GTGA
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| Protein sequence | MTDIEVHETS AVIDNGRFGT RTIRFETGHL ARQAAGSVVA YLDDETMLLS ATTASKAPKE
HFDFFPLTVD VEERMYAAGR IPGSFFRREG RPSTDAILTC RLIDRPLRPS FVDGLRNEIQ
VVITVMSLNP ADLYDVVAIN AASASTQLAG LPFSGPIGGV RVALIEGQWV AFPTHEQLEN
AVFDMVVAGR VVGDDVAIMM VEAEATEKVI DLIGEGAQAP TEEVVAAGLE ASKPFIKVLC
EAQAQLAQVA AKATGEFPTF PAYQADAFEA VEAAGASDLA QALTIAGKQE REGRIDEVKA
SVLEKLAAQF EGREKEVGAA FRSLTKKLVR QRILRDKVRI DGRGLTDIRS LGAEVAIIPR
THGSALFERG ETQILGVTTL NMLRMEQQID SLSPETHKRY LHHYNFPPYS TGETGRVGSP
KRREIGHGAL AERALMPVLP KRDEFPYAIR QVSEALGSNG STSMGSVCAS TMSLLNAGVP
LKAPVSGIAM GLVSDEVDGK TEYVALTDIL GAEDAFGDMD FKVAGTKQFV TALQLDTKLD
GIPSEVLASA LSQARDARLA ILEVMAEAID VPDEMSPFAP RVTSVKIPTD KIGEVIGPKG
KMINSITEQT GADISIEDDG TIYVGAADGP SAEAAIGLIN AIANPQLPKV GERFLGTVVK
TAAFGAFVSL LPGKDGLIHI SKLGNGKRIG KVEDVVKVGD KLRVEIADID QRGKISLVLV
SEEEGADKAA APAAETAETS APESSDQ
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