Gene Amir_5794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5794 
Symbol 
ID8330001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6830296 
End bp6831543 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content74% 
IMG OID644946230 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_003103453 
Protein GI256379793 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGTTGT GGACTGTGCG CGGGGACGGG CGGGTCACCG AGGGTGACAC CATCGCCCCG 
GAGGAGCGGC CCAGTTGGCC GCTGACCCTC GGGTTCGGCG CGCAGCACTT CGTGGCCATG
ATCGGCGCCA CCGTCCTCGT CCCCGCCACC ACCGGGCTGC CGGTCGGCAC CGCCCTGCTG
TTCTCCGGCG TCGGCACCCT GCTGTTCCTG ATGATCACCC GCAACCGGGT GCCCGGCTAC
GTCGGCTCCT CGTTCGCGTT CATCGCCCCG CTCCAGGCCG CCCGGCTCGA AGGCGTCCCG
GCCCAGCTCG GCGGCGTGCT CGCCACCGGA CTGCTGGTCG TGGTCGTCGG CATCGCGATC
AAGGCGCTGG GCGTGCGCAC CCTCGACTCG ATCATGCCGC CCGCCGTCAC CGGCGCCGTG
GTCATCCTGA TCGGCCTGAA CCTCTCCAAG GCCTCCACCG GCGCGTTCTC CCAGCAGCCG
CTCATCGCCG GGCTCACCCT CGGCGTGATC ATGCTGTGCG GGGTGCTCGG CCGCCGCGCG
TTCTTCCGGT TCTCGGTCCT GCTCGGCGTC CTCGCGGGCT GGGGCCTCGG CTTCGCGCTC
GGCGTCGTGG ACACCTCCGC CGTGGCCGAG GCCGCCTGGT GGGGCCTGCC CGAGGCGCAC
GCGCCGGAGG TCCGCCCGTC CGTGGTGCTG CTGTTCCTGC CCGTGGTCAT CGTGCTGGTG
GCCGAGAACA TCGGCCACGT CAAGGCGATC GCCGCCCTGT CCGGCCGCGA CCTGGACGGC
AGCGTCGGCG ACGCGGTCAT CGCCAACGGC CTGTCCACGA CGCTGGCCGG TCTCGGCGGC
GGCGTCGGCA CCACCACCTA CTCGGAGAAC ATCGGCGTCA TGGGCGTGAC GCGGGTGTTC
TCCACCGCCG CCTACGCGGT CACGGCCGCG GCGGCGATCG CCCTGTCGTT CTGCCCGAAG
GCCCTGGCCC TGCTCTCCAC CATCCCGCCC GGCGCGCTGG GCGGGGCGAC CCTGGTGCTG
TTCGGCCTGA TCGCCGTGGT CGGCGTGCGG ATCTGGCAGG ACAACCGGGT GGACCTGACC
AACCCGGCCA ACGCGCTGGT CGGCGGGGCG GCGCTGGTCG CCGGGGTCGG CGACCTGACC
ATCGCCGTCG GCGACCTGGA GCTGGGCGGG CTGGTGTGGG GCTCGCTGCT GGTGGTCATC
CTGCACCCGC TGCTGCGCAG GCTCTGGGCC GTCCGCGCGG GCGCCTGA
 
Protein sequence
MALWTVRGDG RVTEGDTIAP EERPSWPLTL GFGAQHFVAM IGATVLVPAT TGLPVGTALL 
FSGVGTLLFL MITRNRVPGY VGSSFAFIAP LQAARLEGVP AQLGGVLATG LLVVVVGIAI
KALGVRTLDS IMPPAVTGAV VILIGLNLSK ASTGAFSQQP LIAGLTLGVI MLCGVLGRRA
FFRFSVLLGV LAGWGLGFAL GVVDTSAVAE AAWWGLPEAH APEVRPSVVL LFLPVVIVLV
AENIGHVKAI AALSGRDLDG SVGDAVIANG LSTTLAGLGG GVGTTTYSEN IGVMGVTRVF
STAAYAVTAA AAIALSFCPK ALALLSTIPP GALGGATLVL FGLIAVVGVR IWQDNRVDLT
NPANALVGGA ALVAGVGDLT IAVGDLELGG LVWGSLLVVI LHPLLRRLWA VRAGA