Gene Amir_5792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5792 
Symbol 
ID8329999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6828793 
End bp6829443 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content76% 
IMG OID644946228 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103451 
Protein GI256379791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC AGGGCAGGAC GCTGCGCAAG GACGCGCGCC GCAACCTGGA GAAACTGCTG 
GGAGCGGCGG CCGAGGTGTT CCGCGAGCGC GGCCTCGGCG CGCCGCTGGA GGAGATCGCC 
CAGCGCGCGG GCGTCAGCGC GGGCACCCTC TACAACCGGT TCGGCACGCG CGAGGCGCTC 
GTCGACGCCG TCGTGCCCGA ACTGGTCGCC GGGCAGCTCA CCTCGGTGGT GGACGCCGCG 
CGCGCCCTGG ACGACCCCTG GGAGTCCTTC GCGGCCTACC TGGAGGGCAT GTGCGGCCTC 
CAGGCCTCGC AACCGGTGTT CGCCGACGTC CTGACCGGCC GCTACGGCGC CGCCGAGCGC 
CTCGGCGAGC TGTGCCACGC GCAGAACCTC AACGCCGCCG ACATCGTCGA GCGGGCCCGC 
GCCTCGGGCG CGCTGCGCGC CGACTTCGCC TCCTCGGACG TCGCCGTGGT GTTCCTGTGC 
GTGGCCAGGG TCGTGGAGGC CACGGCGGGC ATCGCCGACG ACGTGTGGCG CCGCCTGCTC 
GCGGTGCTGC TCGACGGCCT GCGCGCCGAC GCCGCCCACC CGCTGCCCGT GCCCGCGCTC 
ACCGCCGCGC AGCTCGACGC GGTCACCGCG CGCGCCTCCA CCCGGAGGTG A
 
Protein sequence
MAEQGRTLRK DARRNLEKLL GAAAEVFRER GLGAPLEEIA QRAGVSAGTL YNRFGTREAL 
VDAVVPELVA GQLTSVVDAA RALDDPWESF AAYLEGMCGL QASQPVFADV LTGRYGAAER 
LGELCHAQNL NAADIVERAR ASGALRADFA SSDVAVVFLC VARVVEATAG IADDVWRRLL 
AVLLDGLRAD AAHPLPVPAL TAAQLDAVTA RASTRR