| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5787 |
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| Symbol | |
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| ID | 8329994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6824722 |
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| End bp | 6825315 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644946223 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003103446 |
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| Protein GI | 256379786 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGAG TCACCGGCGC GTTAGGGGTC GACGGGCGGT TCGACCCCGA GCAGGTTCGG
GCAGCGGCAG CGGGGGACAG GGCTGCCGTG CGCGAACTGC TGGCGGTGGT TCGCCCGGTC
GTGGTGCGCT ACTGCCGCGC GAGGGTGGGC AGGCAGGAGC GGACGTTCGC GTCCGCCGAC
GACGTGGCGC AGGAGGTGTG CCTGGCGGTG CTGACGGCAC TGCCGAGCTA CCGCGACCAG
GGGAGGCCGT TCCTGGCCTT CGTGTACGGC ATCGCCGCGC ACAAGGTCGC GGACGCGCAC
CGGGCCGCCG CCCGCAACCG GGCGGAACCG GTGCCGGAGC TGCCCGACTC GGTCTCGACC
GAGGCGGGCC CGGAGACCAG GGCGCTGCAC GGCGAGCTGT CCGACCGGAT GGCGCGGCTG
CTGCGCGTCC TGCCGGACAA GCAGCGGGAG ATCCTGGTGC TGCGGGTCGT GGTCGGCCTG
TCGGCCGAGG AGACCGCGCA GGCGGTCGGC TCGACGCCCG GCGCGGTGCG GGTCGCGCAG
CACCGGGCGC TCGCCAAGCT GCAGAAGATC GTGCGCCAGC CGCACCGGGT GTGA
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| Protein sequence | MDGVTGALGV DGRFDPEQVR AAAAGDRAAV RELLAVVRPV VVRYCRARVG RQERTFASAD
DVAQEVCLAV LTALPSYRDQ GRPFLAFVYG IAAHKVADAH RAAARNRAEP VPELPDSVST
EAGPETRALH GELSDRMARL LRVLPDKQRE ILVLRVVVGL SAEETAQAVG STPGAVRVAQ
HRALAKLQKI VRQPHRV
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