Gene Amir_5785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5785 
Symbol 
ID8329992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6822244 
End bp6823335 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content75% 
IMG OID644946221 
Productamidohydrolase 2 
Protein accessionYP_003103444 
Protein GI256379784 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAACGC CGCTCGCGGT GGTCGAGACC ACCCCATTGA TCGACCACCA CTGCCACGGG 
GTGCTCGGCG GGGAGCTGGA CCGGCGGGCG TTCGAGGCGC GCCTGACGGA GGCGTCGGTC
GCGGCTCCGG GGACGAGCCT GTTCGACACG GCGGTGGGGT TCGCGGTGCG GCGGTGGTGC
GCTCCCGTGC TGGACCTGCC GCCGCACGCC TCCCCGGACG CCTACCTGGA GCGGCGGGCC
GAGCTGGGGG CGGACGAGGT CAACCGGCGG TTGATCGGGG CGGCCGGGGT GGAGCTGTTC
CTGGTCGACG CGGGGCTGCC GGGTGAGCTG GTCGACCCGG CCGCGTACGG CGGGCGCTCG
CTGGACGTGC TGCGGTTGGA GCGGCTGGCG GAGCTGCTGG TGGGGGAGGG CGCGGCGGGG
TTCCCGGACC GGGTGCGGGC GGCGCTGGGG CGCTCGGGGG CGGTGGCGGC CAAGTCGATC
GCGGCCTACC GGGTGGGGCT CGACCTCGAT CCCGCGCGGC CGTCCGACGG CGAGGTGGTG
CGGGCCGCCT CGCGCTGGCC GGCCTCGGGG TCCGGGCGGT GCGCCGATCC GGTGCTGTCG
CGGTTCCTGG TGTGGGAGGC GCTGGAGCGC GGGCTGCCGG TGCAGTTCCA CGTCGGGTAC
GGGGACTCGG ACCTCGACCT GCACCGGGCC GATCCGGCGC TGCTCACCCC GCTGCTGCGG
GCGGTCCAGC CGCTCGGGGT CCCGGTGCTG CTGCTGCACA ACTACCCGTT CCACCGGACC
GCCGGGTACC TCGCCCAGGT TTTCCCGCAC GTGTACGCGG ACCTCGGGCT GGCCACGCAC
GGGGTGGGGG ACCGGGCCGC CGCCGTGCTG GCCGAGGCCC TGGAACTGGT GCCGTGCGGG
AAGTTCCTCT ACTCGTCGGA CGGGTACGCG CTGGCGGAGC TTCACCACCT CGGCGCGCTG
CTCTATCGAC GTGCGCTGTC GGATTTGCTG CGGGGCAAGC TGGAAAGCGG TTCTCTTTCC
GGTGAGGACG CCGTGCGGAT CACCCGGATG GTGAGCGGCG GCAACGCCCG CCGCGCCTAC
CGGATCGACT AA
 
Protein sequence
METPLAVVET TPLIDHHCHG VLGGELDRRA FEARLTEASV AAPGTSLFDT AVGFAVRRWC 
APVLDLPPHA SPDAYLERRA ELGADEVNRR LIGAAGVELF LVDAGLPGEL VDPAAYGGRS
LDVLRLERLA ELLVGEGAAG FPDRVRAALG RSGAVAAKSI AAYRVGLDLD PARPSDGEVV
RAASRWPASG SGRCADPVLS RFLVWEALER GLPVQFHVGY GDSDLDLHRA DPALLTPLLR
AVQPLGVPVL LLHNYPFHRT AGYLAQVFPH VYADLGLATH GVGDRAAAVL AEALELVPCG
KFLYSSDGYA LAELHHLGAL LYRRALSDLL RGKLESGSLS GEDAVRITRM VSGGNARRAY
RID