Gene Amir_5784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5784 
Symbol 
ID8329991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6820903 
End bp6822195 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content74% 
IMG OID644946220 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003103443 
Protein GI256379783 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.108507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCGCA GCGCCAACCT GCCCAAGGGG CTGGTCGAGC GGTTCCGCGT GCGCGAGGGG 
GACGTCCCGG ACGACGCGGG CTGCCGGATG CTGCACGTGG ACATGGACGC CTTCTACGCG
TCGGTCGAGA TCCGCGACCG GCCCGAGCTG GCGCGCCTGC CGGTCGTGGT CGGCGGCACC
GCGCACCGGG GCGTGGTGGC ATCGGCGAAC TACCTGGCCC GCGAGTTCGG CGTCCGCTCC
GCCATGCCCA CCGCGCACGC CAGGCGCCTC GCCCCGCACG CGGTGTTCCT GCCGCCGGAC
TTCACCAAGT ACCGGGACGT CTCGCGCGGC GTCATGGAGC TGTTCCGCCA GGTCACGCCG
CTGGTCGAGC CGCTGAGCCT GGACGAGGCG TTCCTGGACG TCGGCGGCGC GCTGCGCAGG
CTGAGGGCCA CGCCCGCCGA GATCGCCGCG CGCGTCCGGG TCGACGTGGA GCGGGAGCAC
GGCATCACCT GCTCGGTCGG GGTGGCGTCG ACGAAGTTCC TGGCGAAGCT GTCCTCCGGC
ATGTGCAAGC CGGACGGCCT GATGGTGGTG CCGAAGGACC GGGCGCTGGA GTTCCTGCAC
CCGCTGCCGG TGGGCGCGCT GTGGGGCGTC GGCAAGCGCA CCGCCGAGCA GCTGGACCGG
TTGGGTCTGG AGACGGTCGG GGACGTGGCG GCGGCCCCGC TGCTGCGGCT GCGCAAGGCG
GTCGGCGTGG CGCTGGCCGA GCACCTGTAC GCGCTGGCCA GGGGCCATGA CGACCGGCCC
GTGGTGCCGT ACACCAGGGA GAAGTCGATC GGCGCGGAGG AGACCTTCGA GGTCGACCAC
TTCGATCGCG CGGTGCTGAA GCTGGAGCTG CTGCGGCTGT CCGAGCGGAC GGCGGCGTCG
CTGCGCGCGA AGGGCCTGCG CGGGCGGACG GTGTCGATCA AGGTGAGGTT CGCGGACTTC
ACCACGATCA CCCGGTCGAA GACCCTCCGG GTGGCCACGG ACGTGGCGCG CGAGGTGTAC
GCGACCGCGA CGTCCCTGCT GGACGACCAC GTCCCACCGG GCGCGGTGCG GCTCATCGGG
GTGCGGGTGG AGCAGCTGTC CGAGGGCGCG GCGGGGGAGC AGCTGGCGTT CGACGCGCCC
GAGCGCGGCT GGCGCGAGGC GGAACAGGCG GCCGACCAGG CGAGAACCCG CTTCGGCACG
GCGGCGGTCC GCCCGGCCTC CCTCCTCTCC ACCGCCCCGG CCCGCTCGGC CGAACCGGAA
CCAAAACCGG AACGCCACCC CGAGGAACGC TGA
 
Protein sequence
MGRSANLPKG LVERFRVREG DVPDDAGCRM LHVDMDAFYA SVEIRDRPEL ARLPVVVGGT 
AHRGVVASAN YLAREFGVRS AMPTAHARRL APHAVFLPPD FTKYRDVSRG VMELFRQVTP
LVEPLSLDEA FLDVGGALRR LRATPAEIAA RVRVDVEREH GITCSVGVAS TKFLAKLSSG
MCKPDGLMVV PKDRALEFLH PLPVGALWGV GKRTAEQLDR LGLETVGDVA AAPLLRLRKA
VGVALAEHLY ALARGHDDRP VVPYTREKSI GAEETFEVDH FDRAVLKLEL LRLSERTAAS
LRAKGLRGRT VSIKVRFADF TTITRSKTLR VATDVAREVY ATATSLLDDH VPPGAVRLIG
VRVEQLSEGA AGEQLAFDAP ERGWREAEQA ADQARTRFGT AAVRPASLLS TAPARSAEPE
PKPERHPEER