Gene Amir_5772 details

Gene Information

• Locus tag: Amir_5772
• ID: 8329979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6805477
• End bp: 6807384
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644946208
• Product: Peptidoglycan glycosyltransferase
• Protein accession: YP_003103431
• Protein GI: 256379771
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGGGC CATCGCGCGG CAGGCCCGCG CGCCGTCCGT TGTCCGTCCG CAGGCCCGTG 
CCCGCCAAGC GCGGGAAGGC CGCCAACAGC CGCCTGAGGA TCGCGGTCGG CCGGGTGCTG 
CTGATCACCG CCCTGCTCGC CGCGGGCGTC AAGCTCGTGC AGGTGCAGGG GTTCCAGGCG 
GAGGCGCTCT CCGCGCAGGC CGAGCGGCAG CGGGCCACCC CGATCGACAT CCCGGCCGAG 
CGCGGCTCGA TCACCGACCG CAACGGCAAC CAGCTCGCGT TCAGCATCGA GGCGCGCGCG 
CTCTACGTGC TGCCCGCGCT CATGCGCCAG AAGTGGGACG AGGAGGTCAA GAAGAACCCG 
GAGCTGCAGA GCTACGAGGA GCGCGCCCGC GAGATCGCCG AGTTCGTCCA GAAGACCCTC 
GGGCGCGAGG TGTCCGGCCA GAAGACCGAC GCGGACACCG TCTACGCGCT GCTCACCAAG 
GACATCAGCT ACACCGAGAT CGCCGACCGC GTCGAGCCCG ACAAGGCCGA GGCGATCAGC 
GAGCGGTACG CCGACGTCGG CTTCGAGCGC CGCGCCGTCC GCGTCTACCC CAACGGCGAG 
CTGGCCTCCA ACATCGTCGG CGCGGCGAAC TGGCGCAAGG ACCAGCAGCC ACCGGGCACC 
CAGGGCCTGC TCGGGCTGGA GAACTCGCAG AACAACCTGC TGTCGGGCAC CAACGGCCGC 
CGCATCGTCG ACACCGTCCA GGGCAACGAC ACCGTCGTCA TCCCCGGCCC CGGCCGCTCC 
CGCGAGATCA CCCCGGCCAC TCCGGGCAAG AGCCTGGAGC TGACCATCGA CCTGGACACC 
CAGTACGCGG TGCAGAACAT GGTCACCGAC TACGCCAGGA AGGCGGGGGC GAACAGCGCG 
TCGGCGGTCG TGCTCGACAC CGCCACCGGC GAGATCCTGG CCATGGCCAA CGACAAGACC 
TTCGACCCGA CCGACTTCGG CCGCGCCACC GACGCCCAGC GCAGCAACAC GGCCGTCAGC 
GCGAACTTCG AGCCCGGCTC GGTCCACAAG ATCGTCACCG CCGCCGCGGC CATCGAGGAC 
GGCGTCTACC AGCCGGACAG CGTCCTCACC GTCGACGGCA GCATCAAGGT CGCCGACCGG 
ACCATCAAGG ACTCCACCTG GCACGACACC CAGAAGATGA GCTTCACCGG GGTGTTCGCC 
AAGTCCTCCA ACGTCGGCAC CCTGATGGCC GCCCAGCAGG TCGGCGCCGA CCGGTTCGCG 
GACCTCCAGG CCAAGTTCGG CCTCGGCAGC CGCACCGGTT CCGGCCTGCC CGGCGAGGAG 
GCGGGCCTGG TGCCGCCGCG CCAGCAGTGG TCCGGCTCCA CGTTCGGCAA CCTGCCCATC 
GGCCAGGGCC TCACCGTGAC CCTGCTGCAG ATGACCGGCA TGTACCAGGC CATCGGCAAC 
GACGGCCTGC GCGTGCCGCC GAGGATCATC AAGGCCGAGA TCGGCGCCGA TGGCTCCCGC 
ACCGAGCTGG CCAAGCCCGA GGGCGTGCGC GTGGTCAGCC CGCAGACCGC CAAGACGGTC 
CGCGACATGT TCCGCTCGAT CGTGCAGTCC GCCCCCAACG GGCAGAGCGG CACCGGCACC 
TCGGCGGCCG TCCCCGGCTA CCAGGTGTCC GGCAAGACCG GCACCGGGCA GCAGCTGGAG 
CCCAGCGGCC TGTACAGCAA CTCCAAGTAC TGGATCACGT TCGCGGGCAT CTTCCCGGCG 
GACAGCCCGC GCTTCGCCGT GGGCGTCATG GTGGACAACC CGCAGGCGGG CACCCAGGAG 
AGCGCGTCGT CGGCCCCGCT GTTCCACGAC ATCGCGTCCT ACCTCGCGCA GCGCTACCAG 
GTGCCGATGT CGGCCGAGCC GAGCCCGGTG GTCCCCCTGG TGCTGTGA 

 

Protein sequence

MPGPSRGRPA RRPLSVRRPV PAKRGKAANS RLRIAVGRVL LITALLAAGV KLVQVQGFQA 
EALSAQAERQ RATPIDIPAE RGSITDRNGN QLAFSIEARA LYVLPALMRQ KWDEEVKKNP 
ELQSYEERAR EIAEFVQKTL GREVSGQKTD ADTVYALLTK DISYTEIADR VEPDKAEAIS 
ERYADVGFER RAVRVYPNGE LASNIVGAAN WRKDQQPPGT QGLLGLENSQ NNLLSGTNGR 
RIVDTVQGND TVVIPGPGRS REITPATPGK SLELTIDLDT QYAVQNMVTD YARKAGANSA 
SAVVLDTATG EILAMANDKT FDPTDFGRAT DAQRSNTAVS ANFEPGSVHK IVTAAAAIED 
GVYQPDSVLT VDGSIKVADR TIKDSTWHDT QKMSFTGVFA KSSNVGTLMA AQQVGADRFA 
DLQAKFGLGS RTGSGLPGEE AGLVPPRQQW SGSTFGNLPI GQGLTVTLLQ MTGMYQAIGN 
DGLRVPPRII KAEIGADGSR TELAKPEGVR VVSPQTAKTV RDMFRSIVQS APNGQSGTGT 
SAAVPGYQVS GKTGTGQQLE PSGLYSNSKY WITFAGIFPA DSPRFAVGVM VDNPQAGTQE 
SASSAPLFHD IASYLAQRYQ VPMSAEPSPV VPLVL