| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5770 |
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| Symbol | |
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| ID | 8329977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6802362 |
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| End bp | 6803834 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946206 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003103429 |
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| Protein GI | 256379769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACGC TGACCCTCGC CGAGATCGCC GAGATCGTCG GCGGCAGGCT GCACGGCACC
GACGGCTCGC CCGTCGTGAA GGCGGGCGTC GAGTTCGACA CCCGCAAGCT GCTGCCCGGC
GGGCTGTTCC TGGCCCTGCC CGGCGAGCGG GTCGACGGCC ACGACTTCGC CGCCGCCGCC
GTCGCGGCGG GCGCCGCGGG CGTGCTGGCG GGCCGCGAGG TCCCCGCGCC CTCGGTGATC
GCCCCGCCGG TCGCCCCGGC CGACGAGCAC GAGGGCGCCT ACGTGCTGTC CGGCGACAGC
GACGGCTCCG GCGCCGCCGT GCTCGCCGCG CTGGGCAAGC TCGCCAGGCA CGTCACCGAC
AGGCTCACCG CGGGCGGGCT GACCGTCGTG GGCGTCACCG GCTCCTCCGG CAAGACGTCC
ACCAAGGACC TCATCGCCCA GGTGCTGTCC CCGACGGGCG CCACGATCGC CCCGCCCGGC
TCGTTCAACA ACGAGCTGGG GCACCCCTGG ACCGCGCTGC GCGCCGACGA GGACACCGGC
TACCTCGTGC TGGAGCTGTC CGCGCGCGGT CCCGGCCACA TCGCCGACCT GTGCGCCGTC
GCGCCCCCGA GGATCGGCGC GGTGCTCAAC GTCGGCACCG CGCACCTGGG CGAGTTCGGC
TCCCGCGAGG GCGTCGCGCG CACCAAGGGC GAGCTGGTCG AGGCCCTGCC CGAGGACGGC
GTCGCGGTGC TCAACGCCGA CGACCCGCTC GTGCTGGCCA TGGCCGAGCG CACGAAGGCG
AAGGTCGTGC TCGTCGGCGA GCACAGCAGG GCGCAGGTCC GCGCGGTCGA CATCGTCCTC
GACGAGCAGG CCCGCCCCGG TTTCACCCTC CTCACCCCGC ACGGCAGCGC GCGCGTCCAG
CTCGCCGTGC ACGGTCCCCA CCAGGTCGGC AACGCGCTCA CCGCCGCCGC CGTCGCGCTG
GAGCTCGGGG CGACGCCCCA GCAGGTCGCC GACCGGCTCG GCTCGGCGAA GCCGATCTCC
GCGCACCGCA TGGAGGTCGT CGACCGCGCC GACGGCGTCA CGGTCGTCAA CGACGCCTAC
AACGCCAACC CGGAGTCGGT GAAGGCCGCG CTGAAGTCGC TGGCCACCAT CTCCCGCTCC
ACCACCCCCG CGCGGCGCAG CTGGGCCGTG CTGGGGCCGA TGGCGGAGCT GGGGGCCGAC
TCGGTGCGCG CGCACGACGA GATCGGCAGG CTCGCGGTGC GCCTGGACGT CAACCGGCTG
GTCGTCATCG GTGACGACGC CCGCGCGATG CACCAGGGAG CGCACCTGGA AGGATCATGG
GGCGAGGAAT CGATCCTGGT GCCGGATGTC GCTGCGGCGA TCGAACTGCT GCGCGACGAG
GTGCGGCCCG GTGACGTCGT TCTGGTTAAG GCATCCAACT CATACGGCCT GTGGCGGGTT
GCCGAGGCTC TCCTGGAGGC GGGCAGCAAG TGA
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| Protein sequence | MITLTLAEIA EIVGGRLHGT DGSPVVKAGV EFDTRKLLPG GLFLALPGER VDGHDFAAAA
VAAGAAGVLA GREVPAPSVI APPVAPADEH EGAYVLSGDS DGSGAAVLAA LGKLARHVTD
RLTAGGLTVV GVTGSSGKTS TKDLIAQVLS PTGATIAPPG SFNNELGHPW TALRADEDTG
YLVLELSARG PGHIADLCAV APPRIGAVLN VGTAHLGEFG SREGVARTKG ELVEALPEDG
VAVLNADDPL VLAMAERTKA KVVLVGEHSR AQVRAVDIVL DEQARPGFTL LTPHGSARVQ
LAVHGPHQVG NALTAAAVAL ELGATPQQVA DRLGSAKPIS AHRMEVVDRA DGVTVVNDAY
NANPESVKAA LKSLATISRS TTPARRSWAV LGPMAELGAD SVRAHDEIGR LAVRLDVNRL
VVIGDDARAM HQGAHLEGSW GEESILVPDV AAAIELLRDE VRPGDVVLVK ASNSYGLWRV
AEALLEAGSK
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