| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5743 |
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| Symbol | dnaE |
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| ID | 8329950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6768297 |
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| End bp | 6771827 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644946180 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_003103403 |
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| Protein GI | 256379743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.12723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGACT CGTTCGCGCA CCTCCACGTG CACACCGAGT ACTCGATGCT CGACGGGGCG
GCGAAGCTCA AGGACATGTT CGCCGAGTGC GAGCGGCTGG GCATGACGGC CGCGGCGATC
ACCGACCACG GCAACATGTA CGGGGCCTAC GACTTCTTCC GCCAGGCCAC CGCCGCGGGC
GTCAAGCCGG TCATCGGCAT CGAGGCGTAC ATGGCGCCCG AGTCCCGGTT CAACAAGAAG
CGCGTCACCT GGGGCGACCC CGGCCAGAAG GCCGACGACG TGTCCGCCAG CGGCGCCTAC
ACGCACCAGA CGATCTGGGC GCGCACCGTC GACGGCCTGC ACAACCTGAT GAAGTGCTCC
AGCCGCGCCT CCACCGAGGG CCAGCTGGGC AAGTGGCCGC GCATGGACGC CGAGCTGCTC
GCCGAGCACT CCAAGGGCCT CATGGCCACC ACCGGCTGCC CCTCCGGCGA GGTGCAGACC
CGGCTGCGCC TGGGCCACGA GAAGGAGGCG ATCGAGGCCG CGGGCAAGTG GCGCGAGATC
TACGGCGCCG ACAACTTCTT CGTCGAGCTG ATGGACCACG GCATCGAGCT GGAGCGGCGG
GTCCGCGACG GGCTGGTCGA CATCGCCCGC AAGCTCGACA TCCCGTTCGT GGTCACCAAC
GACTCGCACT ACACGTACGC CGAGGACCGC GAGGCGCACG AGGCGCTGCT GTGCGTGCAG
ACCGGCAAGA CCCTGCAGGA CCCGAGCCGG TTCAAGTTCG ACGGCACCGG CTACTACCTG
AAGTCCCCGC AGGAGATGTA CGCGATCGAC TCCTCGGACG CGTGGCAGGA GGGCTGCCGC
AACACGCTGC TGGTGGCCGA GAAGGTCGAC ACGACCGACA TGTTCGCCTT CCAGAACCTG
ATGCCGCGCT ACCCCGTCCC GGAGGGCATG ACCGAGGCGG ACTACTTCCG CGAGCAGGTG
TGGGAGGGGA TGCGCCGCAG GTTCCCCGAG GGCGTCGACG AGGTCCACAC CAAGCAGGTG
GAGTTCGAGA TCGGCGTCAT CCTGCAGATG GGCTTCCCCT CGTACTTCCT GGTCGTCGCG
GACTTCATCA ACTGGGCCAA GGAGAACGGC ATCCGGGTCG GCCCCGGCCG CGGCTCCGCC
GCGGGCGCGC TCATCGCGTA CGCCATGGGC ATCACCGACC TGGACCCGCT GGCGCACGGC
CTGATCTTCG AGCGGTTCCT GAACCCGGAC CGCGTCAGCC CGCCCGACAT CGACATCGAC
TTCGACGAGC GCAGGCGCGG CGACGTCATC CGGTACGTGA CCGACAAGTG GGGCGACGAC
AAGGTCGCCC AGGTCATCAC CTTCGGCACC ATCAAGGCGA AGGCGGCCAT CAAGGACTCC
GCGCGCGTGC TCTACGGCCA GCCCGGCTAC GCCGTCGCCG ACCGGATCTC CAAGGCCATG
CCGCCCGCCG TGATGGGCAA GGACATCCCG CTGTCGGGCA TCTTCGACCC GCAGCACAAG
CGGTACGCCG AGGCGTCCGA GGTGCGCGGC CTGTACGACA CGGACCCGCA GGTCAAGGAG
ATCATCGACA CCGGGCGCGG CCTGGAGGGC CTGATCCGCA ACGCGGGCGT GCACGCCTGC
GCGGTCATCA TGTCCGCCGA ACCGCTGATG GACCACATCC CGGTGTGGAA GCGCCCGCAG
GACGGCTCGA TCATCACGCA GTTCGACTAC CCGACCTGCG AGACGCTCGG CCTGTTGAAG
ATGGACTTCC TGGGCCTGTC GAACCTCACC ACGATCGACG ACGCGCTCAA GAACATGGCG
ATCAACGGCA AGGAGCCGGT CGACCTCGAC AAGCTGGAGC TGACCGACAA GAAGACCTAC
CAGCTCCTGT CGAAGGGCGA CACCCTGGGC GTGTTCCAGC TGGACGGCGG GCCCATGCGG
GACCTGCTGC GGCTGATGCG CCCCGACAAC TTCGAGGACA TCTCGGCCGT GGGCGCGCTC
TACCGCCCCG GCCCCATGGG CGCGAACTCG CACACGAACT ACGCGCTGCG CAAGAACAAG
CTCCAGGAGA TCACGCCGAT CCACCCGTCG CTGGCGGAGG CGCTGGAGGA CATCCTCGGC
ACGACCTACG GCCTGATCGT GTACCAGGAG CAGGTCATGG CGATCGCGCA GAAGCTGGCG
GGCTACACGC TCGGCCAGGC GGACCTGCTG CGCCGCGCGA TGGGCAAGAA GAAGAAGGAG
ATCCTGGACA AGGAGTTCGC GGGCTTCGAG GCGGGGATGC TGGCCAACGG CTTCCCGGCC
GACGCGATCA AGACCCTGTG GGAGATCCTC GTCCCGTTCG CCGACTACGC CTTCAACAAG
GCGCACTCGG CCGCGTACGG CCTGGTCTCG TACTGGACCG CGTACCTGAA GGCGAACTAC
CCGGCCGAGT TCATGGCCGC GCTGCTCACC ACGAACTCCG ACAACAAGGA CAAGTCGGCC
ATCTACCTGG CCGAGTGCCG CCGGATGGGC ATCACGGTGC TCCCGCCGGA CGTCAACGAG
TCCGAGCGCG AGTTCGTCGC GGTCGGCGAG GACGTCCGGT TCGGCCTGGG CGCGATCCGC
AACGTCGGCG CGAACGTCGT CGACGCGATC ATCAAGGCGC GCAAGGAGAA GGGCCGCTTC
ACCGACTTCT CCGACTTCCT GCGCAAGGTC GACGCCACGG TCTGCAACAA GAAGGTCGTG
GAATCGCTGA TCAAGGCGGG CGCCTTCGAC TCGCTGAACC ACCCCCGCAA GGGCCTGCAC
ATGGTGCACG TCGAGGCGGT GGACGCGATC ATGCTGACCA AGAAGGAGGA GGCGCGCGGC
CAGTTCGACC TGTTCGGCGA CGGCGGGGAC GACGGCAACG GCAGCGTCTT CGACGTGCGC
ATCCCCGAGG AGCACTGGGA GTCCAAGCAC CAGCTGACCC TGGAGCGGGA GATGCTGGGC
CTGTACGTGT CCGGGCACCC GCTCAACGGG GTCGAGCAGG TGCTGGACTC CTACTCGGAC
GCCTCCATCG CGCGCATCCT GGAGGGCGAC GTCGCGGACG GCACGCAGGT CACGCTCGGC
GGCATCCTCG CGTCGGTGAC CAGGCGGGTC AACAAGAACG GCGAGCCGTG GGCGTCGGCG
ATGCTGGAGG ACCTCGCCGG TGGCATCGAG GTGCTGTTCT TCCCCAAGAG CTACGTGGTG
CACGGCATGT CCGTGGCCGA GGACGCGATC GTGCTGGTGA AGGCGCGCGT CGCGAAGCGG
GACGACCGGA TCTCGCTGAT CGCCAACGAC CTGGTGGTGC CGGACCTGGC GGAGCTGGGC
AACCAGGCGC TGCGGCTCAA GCTGAACGCG TCGCGCTGCG ACCCGAAGCT GGTGACCTCG
CTGAAGGAAG TGTTGTCGGC GCATCCGGGG ACGACCGAGG TGCACCTCAA CCTCGTGATC
AACAGCAGTC GGCAGACGCT GCTGAAGCTG GACGACGCGC TTCGGGTCAA CCCGACCCCG
TCGCTCAAGG GCGACCTGAA GGCGCTCCTC GGTCCGGGCT GCCTGGGCTG A
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| Protein sequence | MSDSFAHLHV HTEYSMLDGA AKLKDMFAEC ERLGMTAAAI TDHGNMYGAY DFFRQATAAG
VKPVIGIEAY MAPESRFNKK RVTWGDPGQK ADDVSASGAY THQTIWARTV DGLHNLMKCS
SRASTEGQLG KWPRMDAELL AEHSKGLMAT TGCPSGEVQT RLRLGHEKEA IEAAGKWREI
YGADNFFVEL MDHGIELERR VRDGLVDIAR KLDIPFVVTN DSHYTYAEDR EAHEALLCVQ
TGKTLQDPSR FKFDGTGYYL KSPQEMYAID SSDAWQEGCR NTLLVAEKVD TTDMFAFQNL
MPRYPVPEGM TEADYFREQV WEGMRRRFPE GVDEVHTKQV EFEIGVILQM GFPSYFLVVA
DFINWAKENG IRVGPGRGSA AGALIAYAMG ITDLDPLAHG LIFERFLNPD RVSPPDIDID
FDERRRGDVI RYVTDKWGDD KVAQVITFGT IKAKAAIKDS ARVLYGQPGY AVADRISKAM
PPAVMGKDIP LSGIFDPQHK RYAEASEVRG LYDTDPQVKE IIDTGRGLEG LIRNAGVHAC
AVIMSAEPLM DHIPVWKRPQ DGSIITQFDY PTCETLGLLK MDFLGLSNLT TIDDALKNMA
INGKEPVDLD KLELTDKKTY QLLSKGDTLG VFQLDGGPMR DLLRLMRPDN FEDISAVGAL
YRPGPMGANS HTNYALRKNK LQEITPIHPS LAEALEDILG TTYGLIVYQE QVMAIAQKLA
GYTLGQADLL RRAMGKKKKE ILDKEFAGFE AGMLANGFPA DAIKTLWEIL VPFADYAFNK
AHSAAYGLVS YWTAYLKANY PAEFMAALLT TNSDNKDKSA IYLAECRRMG ITVLPPDVNE
SEREFVAVGE DVRFGLGAIR NVGANVVDAI IKARKEKGRF TDFSDFLRKV DATVCNKKVV
ESLIKAGAFD SLNHPRKGLH MVHVEAVDAI MLTKKEEARG QFDLFGDGGD DGNGSVFDVR
IPEEHWESKH QLTLEREMLG LYVSGHPLNG VEQVLDSYSD ASIARILEGD VADGTQVTLG
GILASVTRRV NKNGEPWASA MLEDLAGGIE VLFFPKSYVV HGMSVAEDAI VLVKARVAKR
DDRISLIAND LVVPDLAELG NQALRLKLNA SRCDPKLVTS LKEVLSAHPG TTEVHLNLVI
NSSRQTLLKL DDALRVNPTP SLKGDLKALL GPGCLG
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