Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5734 |
Symbol | |
ID | 8329941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6759781 |
End bp | 6761052 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946171 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003103394 |
Protein GI | 256379734 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA CCGCACCGGA CAGCGCCACG TCCAGCGACG AGAACGGCCG GTTCGCCTGG TACCGCACCC TCGGGCAGCG CGGAAGGCGC GCCTTCGTCG GCGCGTTCGG CGGCTACGGC CTCGACTCCT ACGACTTCCA GGTCCTGCCG CTGGGCCTGG TCGCCATCAC CGCCTACTTC GGCATCACCA AGGGCGAGGC GGGCCTGCTC ACCACGGTCA CCCTCGTGGT GAGCGCGCTC GGCGGCGCCA TCGCGGGCGT GCTCGCCGAC CGCCTCGGCC GCACCCGCGC CCTGATGATC ACCGTCGTCA CCTACGCCGT GTTCACCGTC CTGTGCGGGT TCGCCACCAG CTACGAGATG CTCCTGGTGT TCCGCGCCCT GCAGGGCCTG GGCTTCGGCG GCGAGTGGGC GGTCGGCGCG ATCCTGGTCG CCGAGTACTG CCAACCCCGC TACCGGGGTC GCACCGTCGC GTTCATCCAG AGCTCGTGGG CGGTCGGCTG GGCGCTGTCG GTGCTGGTCT ACGCGCTGGT GTTCGAGCTG GTGCACCCCG ACCTGGCCTG GCGGGTGCTG TTCTTCACCG GCGCGCTGCC CGCCCTGCTG ATCATCTACG TCCGCCGCCG CGTCCAGGAC GCCCCCGAGG CCACCGCCCG CCGCACCGCC AGCGCCGAGC GCGGCTCGTT CGGCGCGATC TTCACCGGCC CGCTGGCCCG CACCACCCTG TTCGCGTCCC TGCTGGCCAC GGGCGTGCAG GGCGGCTACT ACACGCTCGC GACCTGGCTG CCGACGTACC TGAAGTCCGA GCGCGGCCTG ACCGTCATCG GCACCGGCGG CTACCTGGCG TTCCTGATCT CCGGCGCGTT CACCGGCTAC GTGTGCGGCG GGCACCTGAC CGACAAGCTG GGCCGCAAGC GCACGTTCGC GCTGTTCTCG GTGCTGTCGG CGGCGCTGAT CCTGCTCTAC ACCCGCATCC CGGAGGGCGC GAACACCACG ATCCTGTTCC TGGGCTTCCC GCTGGGCTTC TGCATGTCGG CGATCTTCAG CGGGTTCGGC TCGTTCCTGT CGGAGCTGTA CCCGGCGCAC CTGCGCGGCA CCGGCCAGGG CTTCACCTAC AACTCCGGGC GGGCCGTGGG CGCGCTGTTC CCGGCGGCGG TCGGGTTCGC GGCCGAGAGC GCGGGCGTGG GCGGCGCGAT GGCGTTCGGG GCGGCGGCCT ACGGCATCGC GGTGCTGGCG CTGCTGGGCC TGCCGGAGAC GCTCGGCCGG GAGCTGGGGT GA
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Protein sequence | MSATAPDSAT SSDENGRFAW YRTLGQRGRR AFVGAFGGYG LDSYDFQVLP LGLVAITAYF GITKGEAGLL TTVTLVVSAL GGAIAGVLAD RLGRTRALMI TVVTYAVFTV LCGFATSYEM LLVFRALQGL GFGGEWAVGA ILVAEYCQPR YRGRTVAFIQ SSWAVGWALS VLVYALVFEL VHPDLAWRVL FFTGALPALL IIYVRRRVQD APEATARRTA SAERGSFGAI FTGPLARTTL FASLLATGVQ GGYYTLATWL PTYLKSERGL TVIGTGGYLA FLISGAFTGY VCGGHLTDKL GRKRTFALFS VLSAALILLY TRIPEGANTT ILFLGFPLGF CMSAIFSGFG SFLSELYPAH LRGTGQGFTY NSGRAVGALF PAAVGFAAES AGVGGAMAFG AAAYGIAVLA LLGLPETLGR ELG
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