Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5725 |
Symbol | |
ID | 8329932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6750196 |
End bp | 6751755 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946163 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003103386 |
Protein GI | 256379726 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGGCC CCGTGCGCGC CCTCCTCATC CCGTCCGCCC TGGCCCTCCT CGTCGGCGTC GCGGGGTGCA CCGGGTCGCC CACGCCGAAC GCGGGCGGCA CCGACGACAA CAGCTCCATG GTGCTCGCCC AGGCCGTCGA GCCCACCTCG CTGAACCCGC TGCTCGGCTA CGGCGCGAAC GGCGCCGCCA AGATCTACGA CGGGCTCGTC GCCCACTCCG CCGACCTCAC CCTCGCCCCG GCGCTCGCCG AGCAGCTGCC GACCCCCTCC GCCGACGGCC TGTCCTGGAC CGCGACCCTG CGCGAGGGCG TCAAGTTCAG CGACGGCTCC ACCTTCGGCC CCGAGGACGT CGTCGCCACC TACCGCGCCC TGCTCGACCC GGCCACCGGC TCCACCGTCC GCGCCGACTT CGCCGGGCTG CAGGGCGTCG AGCAGCTGGA CGACCGCACC GTCCGGTTCG CGCTGGAGAA GCCCTGGGCC GCGTTCCCGC ACAAGCTCGT CCTCGGCATC CTGCCCAGCG AGGCCCTCGG CGTGCCCCTG GACCAGGTCA AGCCGGTCGG CACCGGCCCC TACCAGGTGG TCGAGCACAA GCGCGGCGAC CGCCTCCAGC TCACCGCCAA CCCAGGGTTC CGGGGCGGCG CGCCCGGCGT GCGCGAGCTG ACCGTCGTGT TCGTGCCCGA CGACAACACC CGCGCCCAGC GGATGCAGGC GGGCGACTTC GACGGCGCCG AGCTGCCGCC CCGCCTCGCC TCGCTCGCGG GCGCCGCCAG CGGGATGCGG CTGATCACCC ACCGCTCCGC CGACCTGCGC GCGGTCACCC TGCCCACCGG CAACCCGGTC ACCGGCGACC CGGCGATCCG CGCCGCCCTC AACGCCGCCG TCAACCGCGA GGCGCTCGTG CAGAGCCTCC TCGGAGGCAA GGGCGCCGCC GCCAGCACCC CGGTGCCGGA GACCACGCCC GAGCACGTCG ACACCACCGC GTCGATCCGC CACGACAAGG CCCGCGCCGA GCAGCTGCTC GACCAGGCGG GCTGGGCCAG GGGCGCGGAC GGGATGCGCT CCCGCGACGG CGCGCCCGCC CGGTTCACCC TCATGTACCC GATCGGCGAC GTCGTCCGCA ACGACCTGGC CACCGGCTTC GCCGCCGACG CCCGCGCGGT CGGCGTCGAC GTGCAGCTCG CGGGCCTGGC CTGGGACTCG ATCCGGCCCC GCCTCGGCCA GGACGCGCTG CTGTGGGCAG GCGGCTCCCC GTTCGACCCC GACCTCGCCC TCACCGCCGC GCTGCGCACC GGCAACCCGT GGGGCTACTC CGACCCGGTC GTGGACGCCG CGCTCGACAC CGGCCGCGCC CAGCTCGACC CCGCCCAGCG GGCCACCGCC TACCGGCAGT TCCAGCGCGC CTACGTCGAG GCCCCGGCGA TGGTCGTGCT CGCCCTGGTC CAGCACACCT ACGTGGTGCG CGACAACTGG AACGGCTACC AGCAGGTGGT GGACACGGCG GGCGCCGGTC CGCTCTCCTG GGGGCCGTGG TGGAACATCG AGAAGTGGGG TTCCAAGTGA
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Protein sequence | MSGPVRALLI PSALALLVGV AGCTGSPTPN AGGTDDNSSM VLAQAVEPTS LNPLLGYGAN GAAKIYDGLV AHSADLTLAP ALAEQLPTPS ADGLSWTATL REGVKFSDGS TFGPEDVVAT YRALLDPATG STVRADFAGL QGVEQLDDRT VRFALEKPWA AFPHKLVLGI LPSEALGVPL DQVKPVGTGP YQVVEHKRGD RLQLTANPGF RGGAPGVREL TVVFVPDDNT RAQRMQAGDF DGAELPPRLA SLAGAASGMR LITHRSADLR AVTLPTGNPV TGDPAIRAAL NAAVNREALV QSLLGGKGAA ASTPVPETTP EHVDTTASIR HDKARAEQLL DQAGWARGAD GMRSRDGAPA RFTLMYPIGD VVRNDLATGF AADARAVGVD VQLAGLAWDS IRPRLGQDAL LWAGGSPFDP DLALTAALRT GNPWGYSDPV VDAALDTGRA QLDPAQRATA YRQFQRAYVE APAMVVLALV QHTYVVRDNW NGYQQVVDTA GAGPLSWGPW WNIEKWGSK
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