| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5660 |
|---|
| Symbol | gcvT |
|---|
| ID | 8329867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6672763 |
|---|
| End bp | 6673860 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644946098 |
|---|
| Product | glycine cleavage system aminomethyltransferase T |
|---|
| Protein accession | YP_003103321 |
|---|
| Protein GI | 256379661 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCC GCCGCACCCC GCTGCACGCC GAGCACGAGG CCCTCGGCGC GCACTTCACC
GACTTCGCGG GCTGGCGGAT GCCGCTGCGC TACGACAGCG AGCTCGCCGA GCACCACGCC
GTGCGCTCCT CGGCGGGCCT GTTCGACCTG ACCCACATGG GCGAGATCGT CCTGTCCGGC
CCCGAGGCGG GCGCCGCGCT CGACCACGCC CTGGTCGGCC ACTGCTCGGC CATCGGCGTC
GGCCGCGCCC GCTACACGAT GATCTGCGCC GAGAGCGGCG GCGTCGTGGA CGACCTGATC
GTCTACCGGC TCGCCGAGCA GGAGTACCTG GTCGTCGCGA ACGCCTCGAA CGCGACCACC
GTCGCCGCCG AGCTCGTCGA GCGGGCGAAG GGCTTCGACA CCGAGGTCGT CGACCGCTCC
GAGGACTACG CCCTGATCGC CGTGCAGGGC CCGGCCTCCA CCACCATCCT GGCCGGTCTG
ACCAGCACCG ACCTGGCCTC GGTCAAGTAC TACGCCTCCT ACCCGGCCGA GGTCGCGGGC
AAGCCCGTCC TGCTGGCCCG CACCGGGTAC ACCGGCGAGG ACGGCTTCGA GCTGTTCACC
GCCCCCGCCG ACGCCGCCCA CGTCTGGCGG GCGCTGCTGG AGGCCGGTCA GCCGCACGAC
CTCAAGCCCG CGGGCCTCGG CTGCCGCGAC ACGCTCCGCC TCGAGGCGGG GATGCCGCTG
TACGGCAACG AGCTGGGCCT GGACCGCACC CCGTTCGAGG CGAACCTCGG CCGCGTCGTG
AAGCTCGACA AGCCGGGCGA CTTCGTCGGC CGCGCCGCGC TCGCCGCCGC CGCCGAGGCG
GGCGCCGACA GCACCCTCGT CGGTCTCAGG ACCGCCTCGC GCCGGGCGCC CCGCCACGGC
TACCCCGTGC TCGACGCCGA CGGCGCCGAG ATCGGCGTGG TCACCAGCGG CGCCCTGTCG
CCCACCCTCG GCCACTCGGT GGCGATGGCC TACGTGACCA GGGCCAACGC CGAGCCCGGC
ACCGCGCTGA CCGTGGACGT CCGTGGCCGC CGCGAGCCCG TGGAGGTCGT CGCCCTGCCC
TTCTACAAGC GAAAGTGA
|
|---|
| Protein sequence | MEPRRTPLHA EHEALGAHFT DFAGWRMPLR YDSELAEHHA VRSSAGLFDL THMGEIVLSG
PEAGAALDHA LVGHCSAIGV GRARYTMICA ESGGVVDDLI VYRLAEQEYL VVANASNATT
VAAELVERAK GFDTEVVDRS EDYALIAVQG PASTTILAGL TSTDLASVKY YASYPAEVAG
KPVLLARTGY TGEDGFELFT APADAAHVWR ALLEAGQPHD LKPAGLGCRD TLRLEAGMPL
YGNELGLDRT PFEANLGRVV KLDKPGDFVG RAALAAAAEA GADSTLVGLR TASRRAPRHG
YPVLDADGAE IGVVTSGALS PTLGHSVAMA YVTRANAEPG TALTVDVRGR REPVEVVALP
FYKRK
|
|---|
| |