Gene Amir_5655 details

Gene Information

• Locus tag: Amir_5655
• ID: 8329862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6667146
• End bp: 6667559
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644946093
• Product: S-adenosylmethionine decarboxylase proenzyme
• Protein accession: YP_003103316
• Protein GI: 256379656
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.936645
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAAC TCCCGTGCGA GACCGAGCCC GTCGGCTTGT TCGCAGGACA GCACGTGCTG 
GCTGAGCTCG AAGGCGTGAG CCCGGAGCTG CTCGACGACG AGCGGTTCCT CAGGCACGCC 
CTCGGTGAAG CGCTCACCCA GGCCGACGCC ACGGTGCTGG AGGTGGTCTC CAAGCAGTTC 
GACCCGCAGG GGGTCACGGT CCTGGCCCTG CTGTCGGAGT CGCACGCGTC GATCCACACC 
TACCCGGAAG TCGGGAAGGT GTTCGTCGAC GTGTTCACGT GCGGCACCCG TGCGAAGCCG 
GAGCTGGCGG TGCGCCTGCT CTCGGAGGCG CTCGGCGCGG AGCACGCACG GACGGACACG 
GTCAGGCGAG GCACCGGTCG CGTGCCCGCT CTCGTAGGCG AGGAGAAGTC TTGA 

 

Protein sequence

MSELPCETEP VGLFAGQHVL AELEGVSPEL LDDERFLRHA LGEALTQADA TVLEVVSKQF 
DPQGVTVLAL LSESHASIHT YPEVGKVFVD VFTCGTRAKP ELAVRLLSEA LGAEHARTDT 
VRRGTGRVPA LVGEEKS