Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5652 |
Symbol | |
ID | 8329859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6663953 |
End bp | 6664453 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946090 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003103313 |
Protein GI | 256379653 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCAC GGGACGCCGC GTTCGCGGAG TACTTCGCGG CGCGGGCGGA CGCCATGCGC GGGACCGCCT ACCTGCTGTG CGGCGACTGG CACCGGGCCG AGGACCTGGT GCAGACGGCG TTCACCAAGC TCTACCTGGC CTGGGACCGG CTCGCCAGGC TGGACGCCCT GGACGCGTAC ACCAGGCAGG TGGTCGTGCG CACGTTCGTG TCGGAGACCC GGCGCGGGTG GTTCCGCCGC GTCACCGTGG GTGACTTGCC GGTCGACCGC GCCGCGGTCC CGGCGGGCTC GCCCGAGGAC CGGCAGGTGC TGCTGACCGC GCTGGCGCGG GTGCCCGCCA GGCAGCGGGC GGTGCTGGTG CTGCGGTACT GGGAGGACCT GTCGGTGCGC GAGACCGCCG AGGCGCTCGG CTGCTCCGAG GGCACGGTCA AGAGCCAGGC GGCGCGGGGG CTGAGCGCGC TGCGCGGGCT CGTCGTGGAG CAGCGGGAGG TGGCGTGGTG A
|
Protein sequence | MSSRDAAFAE YFAARADAMR GTAYLLCGDW HRAEDLVQTA FTKLYLAWDR LARLDALDAY TRQVVVRTFV SETRRGWFRR VTVGDLPVDR AAVPAGSPED RQVLLTALAR VPARQRAVLV LRYWEDLSVR ETAEALGCSE GTVKSQAARG LSALRGLVVE QREVAW
|
| |