| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5647 |
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| Symbol | |
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| ID | 8329853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6658747 |
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| End bp | 6659979 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644946084 |
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| Product | integrase family protein |
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| Protein accession | YP_003103308 |
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| Protein GI | 256379648 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAGGC CATCTCTCGA AATCGGCACG TACGGTGACA TCTCCTGCAA GCAGCAGGCC
AACGGATCCT GGCGCGCCCA CGCCCGCTAC CGAGGTAGCG ACGGCGTCAC CCGACCTCTC
CACCGCTTCG GACCCACGGA GCGGAAAGCG ATCAGCTCTC TGAAAAAAGC CCTGGGCGAG
GCGCTGAGCA GTTCCGGTGT GTCGCGCAGC GCCGAGGCGA GGGTGAGGTT CGCGGCAGTA
GCCCAGATGT GGATCGACCG CATCAAGCGG GACAACGTCG GCACCACCTA CGACCGCTAC
CGAGGCCGCC TCGACAAGCA CATCCTGCCC GCGATGGGAA ACCTCTACAT CCAGGAGTGC
ACACCGGCGC GCATCAAGCG CGTCTTGGAG GCGCTGCGAC ACCGAGGGAT GGCGACGGCG
ACCATCCAGG GTATACGGAC GGTCATATCA GGGGTCCTGC AGGAGGCAGT GGATCTAGAG
GTCGTCCACC AAAACTCGGT ACGCCACATG GCCCGTCTTG CCTCCAGTCG ACGGAACCGG
AAGAAGGCCT CCTTCGACTC TGCGCAGCTC ACCGACTTTC TCGCACGTGT GGACGGAGAC
ACGCGCGCAC GACGCGCCGA CATGCCAGAT TTCCTGCGGG TCCTCTTCGG TACGGGTGCA
CGTTTCGGTG AAGTGCTTGC GATCCGTTGG GGTGACCTGA ACCTCGGTGA CGTTCCCGTT
CGGCTCGTGC TCGCCGACGG CAGCCAGGAA ACCGTTCCGG CGCACAGCGC TTGGATCAAC
GGGAACCTCG TCCACGTCAC CGGCCAAGGC GTGGTGCGCC ATGAGGGAAA AACCGCCACG
TCGGTCGGTG TGCTCGCCCT ACCGGACGTG CTCTGGGAGA TGCTGGTGGA GCGTCGGCCC
GCCGTGGCGC GACCGGAGAC CCCGGTTTTT CCGTCGGCGA CCGGGGGATG GCGAGGTCCA
TCGAACGTGC AGCGCACCGT TCGGCTGCTG CGTGACCGGA TCGGGTACCG CGACTTCACC
CTGCGCGTCG GGCGCCGCAC CGTCGCCACC GCCCTAGATG CAGCCGGACA CACCGCGCGC
GAAGTCGCCG GGCAGCTCCG CCACTCGCGC CCGTCCACGA CTCAGGACGT CTACATGAGC
CGTGTCACCG CCAGCCCCGC GCTTGCCCTG TCGCTCGACA AACTGCTTGC CCCCGCCGCA
CCCAAAGCGA TGCCGAGCGC GCGACAGATC TGA
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| Protein sequence | MARPSLEIGT YGDISCKQQA NGSWRAHARY RGSDGVTRPL HRFGPTERKA ISSLKKALGE
ALSSSGVSRS AEARVRFAAV AQMWIDRIKR DNVGTTYDRY RGRLDKHILP AMGNLYIQEC
TPARIKRVLE ALRHRGMATA TIQGIRTVIS GVLQEAVDLE VVHQNSVRHM ARLASSRRNR
KKASFDSAQL TDFLARVDGD TRARRADMPD FLRVLFGTGA RFGEVLAIRW GDLNLGDVPV
RLVLADGSQE TVPAHSAWIN GNLVHVTGQG VVRHEGKTAT SVGVLALPDV LWEMLVERRP
AVARPETPVF PSATGGWRGP SNVQRTVRLL RDRIGYRDFT LRVGRRTVAT ALDAAGHTAR
EVAGQLRHSR PSTTQDVYMS RVTASPALAL SLDKLLAPAA PKAMPSARQI
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