| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5592 |
|---|
| Symbol | |
|---|
| ID | 8329798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6617855 |
|---|
| End bp | 6620113 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644946032 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003103256 |
|---|
| Protein GI | 256379596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TGGAGCAGCG GCCCACCGCG CCCCCGCCCG CCAAGCCCGA CGACGTCAAG
CCCCTCACCC CCGAGCAGGT CGCCCGCGCA CTGCGCGTCG AGCGGCGCGT GGCCGCGATG
CCCGTCGCCG CCGTCGGCAT CACCGCCACC ACCGGACCGC TGCTGTGGCA CGCGAACATG
ATGTCCAGCC TCGGGCAGGG CGGGGCCGCG ATGCTGCTGA TCGGCATCGG CGGCAGCGCG
ATCACCTCCC TGGCCACCAG CGGGTTCGCG CTGGCCGCCG CGCACGGCAC CGAGCTGCAC
GAGGGCCTGC CGCCGGTCCG CAAGGTGCTC GGCGGCGCGG CGACGGCGGG CGCCGGGCTG
GGCCTGTTCG GCGGCGAGCC GATCGTGCTG GGCGGCTACC TGGTGGCCGT GGTGGTCTCC
ACCGGCCGCT GGCAGCTGGC CCGCTGGCGC TCGCGGCGCG CGCTGCTGCG GCAGGTCCGC
GCCGCCCGCG CCGCACTGAC CGCCGCCGAG GAGAGCGAGA CCACGGCGGC CGAGGATGCC
ATCGAGGGGG AGGTCGTGGA CGTGGCCGCG GACCTCCAGG TCTACGTCGA GCGCTGGGCG
GCGGGCGCGG TCAAGCACCT GCCCGACACC CGACTGGTCA ACCCCAGGGA CCTCGGGCAG
GGGCGGTTGT CGTTCGTGGT CCAGTCCGGG GACAGCGGCA CCACCCTCGA CGCCGCCAAC
CTCGCGCTGG GCAAGCTGGT CGGCGCCCTG AAGCTGAAGC TGCCCACCGA CGAGAACGGC
GGGCAGGAGC TGGTGTTCGA CCAGGACAAC CCGGTGCTGG AGGACACCGG GCAGCTGCAC
ATGCAGATCA TCCGGCGCGC GGCCCACACC ATGAGCAGCG CCCGCTTCAC CCCCGAGTTG
GTCTCCGCGC CGGACAACGC CTGCTCGGTG CGCATCGGCG GCTATATCGA CGACGGCACC
TCGGCGTTCT GGGACATCGC CTCGGCGGAC GGCGCGCACA ACGGGTTCGT CCTCGCGGGC
ACCCGCATGG GCAAGTCCTC GCTGTTCGAC GGGCTGGCCT ACCGGTGCCG CCAGCTCGGC
TACCTGATCG CGTTCATGGA CCCGCAGCGC GGCGCGTCCA GCCCAGTGCT GGCCGAGCAC
GCCGACTACC CGGTGCTCTC CGCCGACCAC GTCGCCGACC TCGCCGGATG GCTCACGGTC
GAGGCCGACC ACCGGCAGAC CTGGATGGAG AGCCACCGCC TCGGCAAGAT CAACCCCTGG
ACGACCGCGC CGTGCCTGCC CGACGGCGCC CACCCGGACC CCGCCTGCCC GTGCGGCGGC
GTCGTCCCGC CGGGGATCAT GACCTTCATC GACGAGTGCG ACCAGGTCTT CGCCGCGCTC
GGCGGCGTCT TCGGCGCGCT GGCCAAGCGC ATCAACAAGC TCAACATGGG CATCATCGCC
GCCAGCCAGA TCCCCGGCCA GGAGGTCTTC GGCGGCAGCG AGATGCTCCG CTCCAGCCTG
ACGACCCGGA ACTTCCTGGC CATGCGGGTC AACTCCAAGT CGTCGGCGAA CCTGATCCCC
GGCCTGCCCT ACAGCCCGTA CCTGCTGCCC AACACCAAGG GCCGCGGGCT GATGTGCGGC
GTGGAGTCCC GCCAGATGCA GGTGCAGCTC GACTTCATGC CCCGCCGGGA GGACCACGCG
AGCCAGCCCG CGCCCTACGC CGAGGACCTG TACGTCGGCC TGCCCCGGAT CGAGGGCTGG
CGCCCTACCG CCGCCGCCGC CGAGCGGCTG CTCCCGCACG CCGGTGAGGA CGCCGCCGCC
GCCTCGCGCG CCGAGTCGCT GGAGCGCCTG GCGCTGCTGA TGCGCGGTGA AGCACCCCCC
ACGCCCGCCT CCGTCGGCGC ACCCGAACGC CCGGACGCGC CGACCCATTC GCGGATGCAG
TTCCCGTCCG CCGTCACCCC CGCAGCACCC GCCCCTACGC CGCCAGCTGC ACCTCCCGCC
CCCGTCGCGG GGCTGGTCCG CAGGACGCGC CTGGACCAGC CGGTCGCCGC GGTCCTGCTG
GCGCAGCTGG CCGGGCGCCC GGACGACGAG TGGCTGACCC TGGGCGACCT CGCCCGGCTG
GCCGGGTACG TGCCCGAGGG CGCCGACACC GAGCTGGTGC GGCGGCGCGC GCGGGCGCTG
TCCGGCGAGC TGGGCGCCGC AGGCCGGACG CTCCCGACCG TGCGCCGCGC GCAGGGGATG
TCCGCCACCG TGGCCGACAT CCGCACCGCC TTGTCGTAA
|
|---|
| Protein sequence | MTELEQRPTA PPPAKPDDVK PLTPEQVARA LRVERRVAAM PVAAVGITAT TGPLLWHANM
MSSLGQGGAA MLLIGIGGSA ITSLATSGFA LAAAHGTELH EGLPPVRKVL GGAATAGAGL
GLFGGEPIVL GGYLVAVVVS TGRWQLARWR SRRALLRQVR AARAALTAAE ESETTAAEDA
IEGEVVDVAA DLQVYVERWA AGAVKHLPDT RLVNPRDLGQ GRLSFVVQSG DSGTTLDAAN
LALGKLVGAL KLKLPTDENG GQELVFDQDN PVLEDTGQLH MQIIRRAAHT MSSARFTPEL
VSAPDNACSV RIGGYIDDGT SAFWDIASAD GAHNGFVLAG TRMGKSSLFD GLAYRCRQLG
YLIAFMDPQR GASSPVLAEH ADYPVLSADH VADLAGWLTV EADHRQTWME SHRLGKINPW
TTAPCLPDGA HPDPACPCGG VVPPGIMTFI DECDQVFAAL GGVFGALAKR INKLNMGIIA
ASQIPGQEVF GGSEMLRSSL TTRNFLAMRV NSKSSANLIP GLPYSPYLLP NTKGRGLMCG
VESRQMQVQL DFMPRREDHA SQPAPYAEDL YVGLPRIEGW RPTAAAAERL LPHAGEDAAA
ASRAESLERL ALLMRGEAPP TPASVGAPER PDAPTHSRMQ FPSAVTPAAP APTPPAAPPA
PVAGLVRRTR LDQPVAAVLL AQLAGRPDDE WLTLGDLARL AGYVPEGADT ELVRRRARAL
SGELGAAGRT LPTVRRAQGM SATVADIRTA LS
|
|---|
| |