| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5547 |
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| Symbol | |
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| ID | 8329753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6585183 |
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| End bp | 6587426 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945987 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_003103211 |
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| Protein GI | 256379551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.653518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCC GCCAGCTCGC CCGAACCGCG CGCACCGCCG CCCTGTCGAC CGTGGGCGCC
GTGGTGCTCC TGGTGCTCGT CCCGACCGCG TTCAACGCGG CAACCGGCGG GTCCGCGCCC
AGGGTGCTCG GGCCGCTCGC GCCGTGGTTG TGGCCCGCGC TCGCCGGGTT GTGCGCGGTC
GCGGCCGGGC TGGTGGCGTG GGAGCCGCTG GCCGAGCGGT GGCGGCAGCG CAGGCCGCAC
CACCCGGCCA ACCGGGAGGC CGCGCTGGAG CGGGTGGAGC GGTTCGTGCG CGCGGAGCGG
GAGCGGGCGC TGGCCGCGCA GGTGCGGTTG AAGCTCGGGG TCGCGCCGAA GGTCGGGCCG
TCGCTGCCGA CCAGGATGCG CGCGCCGCTG GTCGTGGTGG GCGAGGCCGG GGCGGGCAAG
ACGACGTTGC TGCTGGAGCT GGCCGAGGCG CTGCTGGAAC GGGCGCGCGA CGACGACGCA
AGACCCCTGC CCGTGGTGGT GGACCTGGCC GCTTGGCGGG GGGATACTGG TTTCACCGAG
TGGCTCCTGG CGCGGGTCGA GTCGCGCTAC CGGATCAGCC CTCGGTTGGG TCGGGTGTGG
TTGGCGGACA GGCGGTTCGC GCTGCTGTTC GACGGGCTGG ACGAGCTGTC CGGCGCCGAG
CGGGCGCGCT GCCTGGCCGA GGTGTCCGCT CTTGGGGTGG CGCAGTTCGC GCTGTGCAGC
CGGAACGCGG ATCTCCCCGG CCTGCCCGAG CACGAGGTCG TCAGGGTCGA CCAGGTGCGC
CGCGGGGACG TGCAGGCGCT GCTCGCCGCG TGCGGGCCGC GCGTCGCGGG GTTGCGCGAC
GAGCTGGAGA AGCAGCCGGA GCTGTGGGCC GAGCTGCGGA CCCCGCTCGC CCTCGGTCTG
CTGGTGCTGG CGCGCCGGGC CGGACGGGTC GACTACCGGC GGGGCGTGCT GGACACCTAC
GTGGCCGAGG CGGTGTCGCG GGTGCCGAGG GCGGAGCGCT TGCTGCGGGC GCTGCGGTTC
CTGGCGCGCG TGGCGGCGGC GCCGCAGCAC CGGGACCTGC TGGCGCGCGG CAGCCTGCCG
CACCGGACGG GGTGGCTGGG CTTCGTGGGG CCGGACGTGG TGCGGCGCCT GTTCGGGCGT
GTGGTGCCGG GCGTGCTGGC GGGCGCGGTG GCGGCGACCT GCCTGGTCGT GGGGGTCGCG
GTCGGCGTGC TGCCCGCGGC GGTCCTGGCG CTGTCGTCGG CCGCGCTGCC CTGGGGACGG
TTCCCGGTGG GGCGGGGTTC GGGTGATGCC GGACCCGGTC GGGGCAAGCG GAGCCGGGGC
GAGTCGCTGC GGGGGTTCCG TTGGGCGGCA ACGGGTTTTG TCGTGGGCGC GGTGGTCGCG
GGGCTGTTCG CCGCTGGTGG TGGGCTGCTG GTCTGGTTGA TCACGCCGTG GCCGTGGGCG
TTGCGGTACG GGGTGGTGGT GGCGGTGGCG TTCGGGTTGG CGCTGGCACT GCTGCGCGAC
CGGTACTGGG CGATCGCGTG CGCCCTCGTG CCCGCGTCGG TGATGGTGCT GACCGGGCCC
GGTGAGTTGC TGCTGGTGGC GTTGGGTTCC GCGCTTGGCA CCGCTGCGGT TGTGGGGGTG
TTCCTGGGCG GGGTCGAGGA GGTGTGGGCC GGGCTGCCTG CGGAGTGGGA GCGGACGGAT
CGGGTTCCCG GTGGGGTCGG GTCAGCCAGC GCAGCGCTTG GCGGGGCGTC ATCCGGCGCG
GCGCTGGATG GCTCGCCATC GGGCGGCGCG GCACTGGACG GTCCGTCATC GGGCAGTGCA
CCGTCCGATG GCGCCGTTTC GGAGCGCGGG CGGTCGCGGT TCCGGGCCGG CACGGGGTTC
GGGGTTGCGG TGAGCGGTGC GCACCGGTGG CTTCCCGGTG CGGGAGCGCT GGGGGTCGTG
GGCGCGCTGG GGGCGGGTGC GGTGGTTGAT CCGGGTGCGG CGTTGGCGCC GTCGGTTGGG
GTGCTGGTCG GGTTGTTGGT GCTGCCGCTG GTGGTTCGGC CGGTTGACCG GGTCGCCGAG
GTGCTGGCCA AGCCGCTCGC GTTGGACGAG TTGCCGCTGG GGCGCGGGGC GTTGGCGCAG
ACCGCTCGGG ACCGGTTGCT GCTGGTGGGC GATCAGCGGT TCCCGCACGC CGTGGTGCGT
GATCACCTCG CCGCGTGCGA CCCGGTGGAC CTGGCCGAAC TGGCGCGACA GATCAGGCCC
GGTGAGGCTT CCGCCAAGGG GTGA
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| Protein sequence | MDSRQLARTA RTAALSTVGA VVLLVLVPTA FNAATGGSAP RVLGPLAPWL WPALAGLCAV
AAGLVAWEPL AERWRQRRPH HPANREAALE RVERFVRAER ERALAAQVRL KLGVAPKVGP
SLPTRMRAPL VVVGEAGAGK TTLLLELAEA LLERARDDDA RPLPVVVDLA AWRGDTGFTE
WLLARVESRY RISPRLGRVW LADRRFALLF DGLDELSGAE RARCLAEVSA LGVAQFALCS
RNADLPGLPE HEVVRVDQVR RGDVQALLAA CGPRVAGLRD ELEKQPELWA ELRTPLALGL
LVLARRAGRV DYRRGVLDTY VAEAVSRVPR AERLLRALRF LARVAAAPQH RDLLARGSLP
HRTGWLGFVG PDVVRRLFGR VVPGVLAGAV AATCLVVGVA VGVLPAAVLA LSSAALPWGR
FPVGRGSGDA GPGRGKRSRG ESLRGFRWAA TGFVVGAVVA GLFAAGGGLL VWLITPWPWA
LRYGVVVAVA FGLALALLRD RYWAIACALV PASVMVLTGP GELLLVALGS ALGTAAVVGV
FLGGVEEVWA GLPAEWERTD RVPGGVGSAS AALGGASSGA ALDGSPSGGA ALDGPSSGSA
PSDGAVSERG RSRFRAGTGF GVAVSGAHRW LPGAGALGVV GALGAGAVVD PGAALAPSVG
VLVGLLVLPL VVRPVDRVAE VLAKPLALDE LPLGRGALAQ TARDRLLLVG DQRFPHAVVR
DHLAACDPVD LAELARQIRP GEASAKG
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