Gene Amir_5546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5546 
Symbol 
ID8329752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6583847 
End bp6584641 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content76% 
IMG OID644945986 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003103210 
Protein GI256379550 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCG AGCAGCTGAA CGGGACCACC GTCCGGTACG ACGTGTCCGG GGAGGGCGAG 
CTGGTCGTCC TGGTGATGGG CACCGGGGCG TCCGGGCGGG TGTGGCACGC GCACCAGGTG
CCCGCGCTGG TGGCCGCCGG GTTCCGGGTG GCCACGCCCG ACAACCGCGG CGTGTTCCCC
GCCGACGCGC GCGGGTTCAC CGTCGACGAC CTGGTGGGGG ACGTGGCCGC GCTAATCGAG
CGGCTCGGCG GTCCGGCGCG GGTGGTCGGG ACGTCGCTGG GCGCGCGGGT GGCGCAGGAG
CTGGCGCTGG CCCGGCCGGA CCTGGTGCGC TCGCTGGTGC TGCTGGCCAC GGCGGGGCGG
ACGGACCCGC TGCAGGTGGC GCTGTCGCGC GGCGAGCGGG AGCTGTTCGA CCGGGGCGTG
ACCACTCCCC CGGCGTACCG GGCGGCGGTG TCGGCGCTGT CGAACCTGTC GCCCGCGACG
CTGCGGGACC CCGTGGCGGC GCGGGACTGG GTGGACCTGC TGGAGTTCAC CGAGCAGGGG
GTGGACGCGG GGGTCAGGGC GCAGCTGGAG CTGGCGGAGT TCGAGCCCCG GCTGGACGCC
TACCGGGGGA TCACCGCGCC GACGCTGGTG GTGGGGTTCG CGGACGACCG GCTGGTGCCA
CCGCACCTGG GGCGCGAGGT GGCGGACGCG ATCCCCGGCG CGCGGTACGC GGAGGTGGCG
GACGCCGGGC ACTACGGGTA CCTGGAGCGG CCCGACGAGG TGAACCGGGT GGTGGTGGGG
TTCCTGCGGG AGTGA
 
Protein sequence
MPTEQLNGTT VRYDVSGEGE LVVLVMGTGA SGRVWHAHQV PALVAAGFRV ATPDNRGVFP 
ADARGFTVDD LVGDVAALIE RLGGPARVVG TSLGARVAQE LALARPDLVR SLVLLATAGR
TDPLQVALSR GERELFDRGV TTPPAYRAAV SALSNLSPAT LRDPVAARDW VDLLEFTEQG
VDAGVRAQLE LAEFEPRLDA YRGITAPTLV VGFADDRLVP PHLGREVADA IPGARYAEVA
DAGHYGYLER PDEVNRVVVG FLRE