Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5537 |
Symbol | |
ID | 8329743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6574151 |
End bp | 6575308 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644945977 |
Product | inner-membrane translocator |
Protein accession | YP_003103201 |
Protein GI | 256379541 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA ACGCTGTGTC TGGCAACTCG AACCCGTTGA GGCGCGTCGG CGCGCTGTTC GACGGCCTGA GGGACTGGTG GGAGCACGCC AAGACCTGGC AGCGCTACCT GGTCTACCTC GCCGCGATCG GCTTCGCCCT GATCCTGCCC GCGCCGTGGA TCGGCTCGTT CATGTCGCCC GGCGCGGACT GGACGACCGT GCTGATCTAC CCGGTCGGCG TGTACATCCT GCTGGCCGTC GGCCTGAACA TCGTGGTGGG CCAAGCGGGC CTGCTCGACC TCGGCTTCGT CGCGTTCTTC GCGATGGGCG GCTACTCGGT GGCCTACTTC GGCACCCAGT ACGGCTGGAA CTACTGGGCC ACCATCGTGA TCGGCATCGG CCTGGCCGCC GTCTCCGGCG TCGTCCTCGG CGCCCCGACG CTGCGCCTGC GCGGCGACTA CCTGGCCATC GTCACCCTCG GCTTCGGCGA GATCGTCCGG ATCACCGCGA ACAACACCGA CGAGATCGGC GGCGCGCGCG GCATCACGAA CATCCCGCAC CCGCCGGACA TGCTCGGCCT GGAGTTCCGG CTCGACCCCG CGCCGTACTA CTACCTGATG GTCGCGGCGA TCGCCGTCGT CATCGTCTTC TCGGTGCGGC TGCAGAAGAG CCGCGTCGGC CGCGCCTGGG CCGCGATCCG CGAGGACGAG GACGCCGCCG AGCTGATGGG CGTGCCGACG TTCAAGTTCA AGCTGCTGGC CTTCGCCATC GGCGCGATGA TCGGTGGTCT CGCGGGCGGT CTGCACGCGG GCAAGGCGGT GTTCATCGAG CCGAACACCT TCCCGTTCAT CCTGTCCGCG ACGATCCTGG CCGCGGTCGT GCTGGGCGGC TCGGGCAACC TGCCCGGCGT CATGCTCGGC GCGTTCGTCA TCGCCTGGCT GCCCGAGCGG TTCCGCGAGG TCAACTGGCT GGAGGACCTG CTCGGCCGTG ACCCGTCCGA GTACCGCATC CTGCTGTTCG GCGGCGTGCT CGTGCTGATG ATGGGTCTGC GCCCCGAGGG CCTGCTCCCG TCGCGGCGCA GGAAAGCCGA ACTGCACGAG GGGACCGGTG GCATGGGCGC GCTCGGCGCC GAAGTCGCCG GGCCGGACAC CGACGCGTCC ACGGAGGCGG TCAAGTGA
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Protein sequence | MKGNAVSGNS NPLRRVGALF DGLRDWWEHA KTWQRYLVYL AAIGFALILP APWIGSFMSP GADWTTVLIY PVGVYILLAV GLNIVVGQAG LLDLGFVAFF AMGGYSVAYF GTQYGWNYWA TIVIGIGLAA VSGVVLGAPT LRLRGDYLAI VTLGFGEIVR ITANNTDEIG GARGITNIPH PPDMLGLEFR LDPAPYYYLM VAAIAVVIVF SVRLQKSRVG RAWAAIREDE DAAELMGVPT FKFKLLAFAI GAMIGGLAGG LHAGKAVFIE PNTFPFILSA TILAAVVLGG SGNLPGVMLG AFVIAWLPER FREVNWLEDL LGRDPSEYRI LLFGGVLVLM MGLRPEGLLP SRRRKAELHE GTGGMGALGA EVAGPDTDAS TEAVK
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