Gene Amir_5537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5537 
Symbol 
ID8329743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6574151 
End bp6575308 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content70% 
IMG OID644945977 
Productinner-membrane translocator 
Protein accessionYP_003103201 
Protein GI256379541 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA ACGCTGTGTC TGGCAACTCG AACCCGTTGA GGCGCGTCGG CGCGCTGTTC 
GACGGCCTGA GGGACTGGTG GGAGCACGCC AAGACCTGGC AGCGCTACCT GGTCTACCTC
GCCGCGATCG GCTTCGCCCT GATCCTGCCC GCGCCGTGGA TCGGCTCGTT CATGTCGCCC
GGCGCGGACT GGACGACCGT GCTGATCTAC CCGGTCGGCG TGTACATCCT GCTGGCCGTC
GGCCTGAACA TCGTGGTGGG CCAAGCGGGC CTGCTCGACC TCGGCTTCGT CGCGTTCTTC
GCGATGGGCG GCTACTCGGT GGCCTACTTC GGCACCCAGT ACGGCTGGAA CTACTGGGCC
ACCATCGTGA TCGGCATCGG CCTGGCCGCC GTCTCCGGCG TCGTCCTCGG CGCCCCGACG
CTGCGCCTGC GCGGCGACTA CCTGGCCATC GTCACCCTCG GCTTCGGCGA GATCGTCCGG
ATCACCGCGA ACAACACCGA CGAGATCGGC GGCGCGCGCG GCATCACGAA CATCCCGCAC
CCGCCGGACA TGCTCGGCCT GGAGTTCCGG CTCGACCCCG CGCCGTACTA CTACCTGATG
GTCGCGGCGA TCGCCGTCGT CATCGTCTTC TCGGTGCGGC TGCAGAAGAG CCGCGTCGGC
CGCGCCTGGG CCGCGATCCG CGAGGACGAG GACGCCGCCG AGCTGATGGG CGTGCCGACG
TTCAAGTTCA AGCTGCTGGC CTTCGCCATC GGCGCGATGA TCGGTGGTCT CGCGGGCGGT
CTGCACGCGG GCAAGGCGGT GTTCATCGAG CCGAACACCT TCCCGTTCAT CCTGTCCGCG
ACGATCCTGG CCGCGGTCGT GCTGGGCGGC TCGGGCAACC TGCCCGGCGT CATGCTCGGC
GCGTTCGTCA TCGCCTGGCT GCCCGAGCGG TTCCGCGAGG TCAACTGGCT GGAGGACCTG
CTCGGCCGTG ACCCGTCCGA GTACCGCATC CTGCTGTTCG GCGGCGTGCT CGTGCTGATG
ATGGGTCTGC GCCCCGAGGG CCTGCTCCCG TCGCGGCGCA GGAAAGCCGA ACTGCACGAG
GGGACCGGTG GCATGGGCGC GCTCGGCGCC GAAGTCGCCG GGCCGGACAC CGACGCGTCC
ACGGAGGCGG TCAAGTGA
 
Protein sequence
MKGNAVSGNS NPLRRVGALF DGLRDWWEHA KTWQRYLVYL AAIGFALILP APWIGSFMSP 
GADWTTVLIY PVGVYILLAV GLNIVVGQAG LLDLGFVAFF AMGGYSVAYF GTQYGWNYWA
TIVIGIGLAA VSGVVLGAPT LRLRGDYLAI VTLGFGEIVR ITANNTDEIG GARGITNIPH
PPDMLGLEFR LDPAPYYYLM VAAIAVVIVF SVRLQKSRVG RAWAAIREDE DAAELMGVPT
FKFKLLAFAI GAMIGGLAGG LHAGKAVFIE PNTFPFILSA TILAAVVLGG SGNLPGVMLG
AFVIAWLPER FREVNWLEDL LGRDPSEYRI LLFGGVLVLM MGLRPEGLLP SRRRKAELHE
GTGGMGALGA EVAGPDTDAS TEAVK