| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5532 |
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| Symbol | |
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| ID | 8329738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6568951 |
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| End bp | 6571617 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945972 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003103196 |
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| Protein GI | 256379536 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCT CAGAAGCCTC CCGCCTGCTC CTGGTCGACG GTCACTCCAT GGCCTACCGG
GCGTTCTTCG CGCTGCCAGC GGAGAACTTC CAGACCGCCA CCGGCCAGAC GACCAACGCG
GTCTACGGCT TCACGTCCAT GCTCATCAAC CTGCTGCGCG ACGAGAAGCC GACGCACATC
GCCGTCGCGT TCGACGTCTC CCGCCGCACC TTCCGCACCG AGGCGTACCC CGAGTACAAG
GCGGGCCGCA GCGAGACCCC GGACGAGTTC CGCAGCCAGG TCAGCCTCAT CCAGGACGTG
CTGACCGCGC TCGCGATCCC GTTCCTGTCC AAGGAGAACT TCGAGGCCGA CGACCTCATC
GCCACCCTCG CCACCCAGGC CACGGCGCTC GGCCAGAAGG TCCTCATCTG CACCGGCGAC
CGCGACGCCC TGCAGCTGGT CAACGACGAC ATCACCGTGC TGTACCCGGT GAAGGGCGTC
TCCGAGCTGG CCAGGTACAC GCCGGAGCTG GTGCTGGAGA AGCAGGGCGT GCCGCCGTCG
CTGTACGCCG ACTACGCGGC GATCCGGGGC GACTCCTCGG ACAACCTGCC CAACACGCCC
GGCGTCGGGC CGAAGACGAT CGTGAAGCTG CTCGGCCAGT TCGGCGACCT GAGCGGGCTG
GTCGAGGGGG TCGACCAGGT CAAGGGCAAG GTCGGCGAGT CGCTGCGCGC GAACCTGGCC
AACATCCTGC TGAACCGGCA GCTCACCGAG CTGGTGCGTG ACGTCGAGCT GCCGCTCGGG
CCCGAGGACC TGGCGGCGAA GGCGTGGGAC CGGGACGCCG TGCACCGGCT GTTCGACCAG
CTGGAGTTCC GGGTTCTGCG GGACCGGCTG TTCGCGACGC TGTCGTCCGC CGAGCCCGAG
GCCGAGGAGG GCTTCGAGGT CAGCGGCGGC GAGCTCGCCG AGGGCGGGCT GGCGGCGTGG
TTCCAGGCGC ACGCGGGAGC CCGCGTCGGC GTCGCCTCGC GCGAGTCCGA CGGCGAGGTC
GAGGGGCTGG CGTTCGCCGT CGGCGGCGAG GGCGGGTACG TGCGGCTGGC CGCGCTGACC
CCCGACGACG AGACCGCGCT GGCCGACTGG CTCGCCTCCG ACGCGCCCAA GGCCGTGCAC
GACGCCAAGC CGCTGCTGCA CCGGCTCCGC GCGCGCGGGC TGCGGCTCGG CGGGCTGACC
AGCGACACCG CGCTCGCCGC GTACCTGGTG CGGCCCGGAC AGCGCTCGTT CTCGCTCGAC
GACCTGGTGC TGCGGCACCT GCAGCGCGAG CTGCGCGCCG AGGAGCCGGG CGGCGGCCAG
CTGTCGCTGC TCGACGAGGA GGAGGACGAG AGCGGCAAGG CGGCCACGGC GGCCATCGTG
CGGGCGTCCG CCGTCGCCGA GCTGGCCGAC GTGCTCGACA CCGAGCTGCA CCGCACCGGC
CAGGAGGGTC TGCTGGCCGA CCTGGAGCTG CCGCTGCTGG CGCTGCTCGC CGAGATCGAG
GGCATCGGCA TCGCCGTCGA CGACGAGCAC CTGACCGGGT TGGAGGCGCA CTTCGCGGCG
GGCGTGAAGC AGGCCGCGCA GGACGCGTAC GCGGTCATCG GCAAGGAGAT CAACCTCGGG
TCGCCCAAGC AGCTGCAGGT GGTGCTGTTC GACGAGCTGG GGATGCCGAA GACGAAGAAG
ACCAAGACCG GGTACACCAC CGACGCGGAC GCGCTGCAGA GCCTGTTCGA GTCCACCCAG
CACCCGTTCC TGCAGCACCT GCTCGCGCAC CGGGACGTCA CCAGGCTCAA GACGACGGTC
GACGGGCTGC TCAAGGCGGT CGCCGACGAC GGGCGCATCC ACACCACGTT CCACCAGACC
ATCGCGGCCA CCGGGCGGCT GTCGTCCACC GACCCGAACC TGCAGAACAT CCCGATCCGC
ACGGACGAGG GCAGGCGCAT CCGCGAGGGG TTCGTGGTCG GGCCGGGGTA CGCGGAGCTG
ATGACCGCGG ACTACAGCCA GATCGAGATG CGGATCATGG CGCACCTGTC CGGCGACGAG
GGGCTGATCG AGGCCTTCCG CAGCGGCGAG GACCTGCACA CGTTCGTGGC GTCCAAGGCG
TTCTCGGTGC CGACCGGCGA GGTGACGGCC GAGCAGCGGC GGCGGGTCAA GGCCATGTCG
TACGGGCTGG CGTACGGGCT GTCCGAGTAC GGGCTGGCGC AGCAGCTGCG CATCCCGGCG
GCCGAGGCGC GGGAGCAGAT GGAGGCGTAC TTCTCGCGGT TCGGCGGGGT GCGGGACTAC
CTCCAGTCCA TCGTGGAGGA AGCCAGGAAG AAGGGGTACA CCGAGACCAT CCTCGGTCGA
CGGCGGTACC TGCCCGACCT GAACAGCGAC AACCGGCAGC GGCGGGAGAT GGCCGAGCGG
ATGGCGCTCA ACGCGCCGAT CCAGGGGTCG GCGGCGGACA TCATCAAGGT GGCGATGCTC
GGGGTGTTCC AGGCCTTGGA GGCCTCGGAG CTGACGTCGC GGATGCTGCT CCAGGTGCAC
GACGAACTCG TGCTGGAGAT CGCGGACGGC GAGCGCGCGG CGGTGGAGTC GCTGGTGCGC
GAGCACATGG GCAACGCGTT CCAGCTCTCG GTGCCGCTGG AGGTCTCGGT GGGCGTCGGG
CGCTCGTGGG ACGAGGCCGC GCACTGA
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| Protein sequence | MSTSEASRLL LVDGHSMAYR AFFALPAENF QTATGQTTNA VYGFTSMLIN LLRDEKPTHI
AVAFDVSRRT FRTEAYPEYK AGRSETPDEF RSQVSLIQDV LTALAIPFLS KENFEADDLI
ATLATQATAL GQKVLICTGD RDALQLVNDD ITVLYPVKGV SELARYTPEL VLEKQGVPPS
LYADYAAIRG DSSDNLPNTP GVGPKTIVKL LGQFGDLSGL VEGVDQVKGK VGESLRANLA
NILLNRQLTE LVRDVELPLG PEDLAAKAWD RDAVHRLFDQ LEFRVLRDRL FATLSSAEPE
AEEGFEVSGG ELAEGGLAAW FQAHAGARVG VASRESDGEV EGLAFAVGGE GGYVRLAALT
PDDETALADW LASDAPKAVH DAKPLLHRLR ARGLRLGGLT SDTALAAYLV RPGQRSFSLD
DLVLRHLQRE LRAEEPGGGQ LSLLDEEEDE SGKAATAAIV RASAVAELAD VLDTELHRTG
QEGLLADLEL PLLALLAEIE GIGIAVDDEH LTGLEAHFAA GVKQAAQDAY AVIGKEINLG
SPKQLQVVLF DELGMPKTKK TKTGYTTDAD ALQSLFESTQ HPFLQHLLAH RDVTRLKTTV
DGLLKAVADD GRIHTTFHQT IAATGRLSST DPNLQNIPIR TDEGRRIREG FVVGPGYAEL
MTADYSQIEM RIMAHLSGDE GLIEAFRSGE DLHTFVASKA FSVPTGEVTA EQRRRVKAMS
YGLAYGLSEY GLAQQLRIPA AEAREQMEAY FSRFGGVRDY LQSIVEEARK KGYTETILGR
RRYLPDLNSD NRQRREMAER MALNAPIQGS AADIIKVAML GVFQALEASE LTSRMLLQVH
DELVLEIADG ERAAVESLVR EHMGNAFQLS VPLEVSVGVG RSWDEAAH
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