Gene Amir_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5527 
Symbol 
ID8329733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6564233 
End bp6564844 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content75% 
IMG OID644945967 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103191 
Protein GI256379531 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG CCGCCTCGCC GGGCAGGCCG CAGGCCACCC GACCCCGCCG CACGGCGGCG 
ACCAAGCAGA AGCTGTTCGA CGCGGCGCTG CGGCTGGTCG GGGAGCGCGG CGCGGCGGGC 
GTCACGGTGG ACGAGATCGC CGCGGGGGCC GGGGTCGCGA AGGGCACCGT GTACTACAAC 
TTCGGCAGCA AGGACGCGCT GGTGGACGCC ATGCTGCGGC ACGGCGTCGA CCTGCTGGCC 
GAACGGCTGC GGGTGTCGGA GGACGCCGAG CCGCCGGAGG CCGTGGCCGC GCTGGTCGAG 
GGGATGCTGG GGTTCTTCGG CGAGTACCCG GCGTTCGCGC AGCTGCTGGT GAGCGAGCTG 
TGGCGCACGC CGGGGCAGTG GCACGGGACG CTCAGCCTGC TGCGGGACGA CATCGTGTCG 
ATCGTGCGGG CGCAGGTGCA GCGGCTGGCC GACCTGGGGC GGCTGCCCGA CGGGGTGCAG 
GTGGGGACGG CGTCGGCGGC GCTGTTCGGC ACGCTGCTGG TGGTGGCGCT GGACTGGCAG 
GTGTTCCAGC CGGAGCGGGA GCTGGCCGAG GTCAGGGACT CGGTGCTGGC GCTGGTGCGC 
GGGCTGACCT GA
 
Protein sequence
MTAAASPGRP QATRPRRTAA TKQKLFDAAL RLVGERGAAG VTVDEIAAGA GVAKGTVYYN 
FGSKDALVDA MLRHGVDLLA ERLRVSEDAE PPEAVAALVE GMLGFFGEYP AFAQLLVSEL 
WRTPGQWHGT LSLLRDDIVS IVRAQVQRLA DLGRLPDGVQ VGTASAALFG TLLVVALDWQ 
VFQPERELAE VRDSVLALVR GLT