| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5514 |
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| Symbol | |
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| ID | 8329720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6546560 |
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| End bp | 6549466 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945954 |
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| Product | ABC transporter related |
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| Protein accession | YP_003103178 |
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| Protein GI | 256379518 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCATCC CTTCCCGCCT TCGCGGCAGG TGGTCGCTCC CCGCGCTGGT CGTGCTCGTC
GCCTTGGTAG GTGGCGTTGT CGTCTGGACG CGCGGGGGCG ACGACCCGCC GCAGGTGCAC
ACCCGTGACG CGGTGATCGA CGTCCCGGAG GCCCCCGGCA GCGACCGGGC CCTCCAGATC
GACACCACCC TCTACCTGCC CGAGAAGACC CCGGCTCCGG CGATCCTGCT CCCGCACGGA
TTCGGCGGCA GCAAGAACAG CGTGGCCACC GAGGCGACCG AACTGGCCCA GCGCGGCTTC
GTCGTGCTGA CCTACTCGGC CCGCGGCTTC GGCCGCAGCA CCGGGCAGAT CTCGCTCAAC
TCGGTCGACC ACGAGGTCAA CGACGCCAAG CGCCTGCTCG ACTGGCTCGC GACCCGCCAG
GAGGTCATGA CCGACGCCCC CGGCGACCCG AGGGTCGGCG TCACCGGCGG CTCCTACGGC
GGCGCGCTCG CGCTGTCCCT GGCGGGCGTC GACCCGCGCG TGGACACCAT CGCGCCCACC
ATCACGTTCA ACGACCTCGC CTCCGCCCTG CTGCCGAACC ACGGCGCCAC CGGCGAGGCG
GTCGACACCC GCACGCCCAC GCCCGGCCCG TCCGGCGACG CGGGCGTGTT CAAGCGCTCG
TGGTCCGGCC TGTTCTTCTC CGCCGGTCTC GGCGGCGGGA ACATGTCCGG CCCCACGCAG
GAGGCCCCCG AGGCCGGTCA GGACGACGAC CAGCAGGTCG GCGCCGCCGC GACCGCCGCC
CCCGAGGGCT CGACGGCCGA GGGCTCGGCG ACCGGTCAGC CCGGTCAGGG CCAGCAGCCC
GGCCAGGGCA GGGGCGCGGC CCCGCTCAAC GGCACCTGCG GTCGCTTCGC CGAGGACGTG
TGCGCGGCGT ACAACGAGAT CGCCACGACC GGCACCGCGG GCCAGGCGTC CCTGGACGTG
CTGCGCCGCG GCTCGCCCTC CGAGCTGACC GGCCGGATCA CCCAGCCGAC CATGATCGTG
CAGGGCGAGC AGGACACCCT GTTCGGCCTC GACCAGGCCG ACGCCAACGC CAGGCAGATC
GCCGCGACCG GCGCCAAGGT CAAGGTCGTC TGGTACGCGG GCGGCCACGA CGGCGGCTCC
CCCGGCCCCG AGCTGCGCGG CCAGATCGCC GACTGGATGG ACTTCCACCT CAACGGCGCG
GGGACCGACC CCGGCACCAC GTTCCAGTAC GCGGTGCAGG GCGCGTTCCG CAGCAGCGGC
TCGGTCGCGC TGCGCGACGT CGTCGCCCCG GCCTACCCCG GTCTCGGCGG CCAGGCCGCG
GTGAACCGGC AGGACGTGGC GCTGACCGGC CGCGAGCAGG CCGTGATCAA CCCGGCGGGC
GGCAACCCGG CGTCGGTGAG CAGCCTGCCC GGTCTGGGCG CGGCGGTCAG CCGGTCCAGC
TCGCTCTCCA GCAGGCTCAC GATCGACATG CCCGGCCAGA CCGCCGTGTT CACCAGCGAG
GCCCTGACCT CGCAGCTGCT GGTGACCGGC GCGTCCACGG TGCGGCTGAA GATCGCCGCC
GTGCCCGGCC AGGCCGTGCC CGAGGGCGGC GCGGTGCTGT TCGCGAAGCT GTACGACGCC
GACGCGAACG GCGGCAAGGT GCTGCCCGGC TCGGCCGTGG CCCCGTTCCG GGTGCCCGAG
CTGCCCGCCG ACGGCACGCC CGTCGAGGTG TCGGTGTCGC TGCCGGGCGT GGTGCGCCCG
GTGGAGAGCG GGCACCGGCT GCAGCTGGCC GTGTCGACCA CCGACCAGGC GTTCGCCAAC
GCGCAGGAGC CCGCCGTCTA CCGGATCGCG CTCGCCGACG GCGACACCGG GAACGTGCGG
GTGCCGGTGG TGACCGGCTC GAACAGGGTC AGCGAGGTGC CCGCCGACGC GCTGTGGGGC
ATCGCGGGCG TGCTCGCGCT GTCCGCCGTC GCGGCCGTCG TCGCGTGGTT CCGGCGCAGG
CTGGCCACCG ACCTCGACCC GGAGCTGGCC GAGGTCCCGC TGGTCATCAA GGGCCTGAAG
AAGTCCTACC CCGGTGGCCT GACCGCCGTG AACGACCTGT CGTTCCGGGT GGAGCACGGC
CAGGTGCTGG GCCTGCTCGG CCCCAACGGC GCGGGCAAGA CCACGTCGCT GCGGATGCTG
ATGGGCCTGA TCCAGCCGAG CGAGGGCGAG ATCAGGGTGT TCGGGCACAG GATCACGCCC
GGCGCCCCGG TGCTCTCCCG CATCGGCTCG TTCGTGGAGG GCTCCGGCTT CCTGCCGCAC
CTGTCCGGCA AGGCCAACCT GGAGCTGTAC TGGTCGGCGA CCGGCAGGCC GCTGGAGCAG
GCGCACTTCG ACGAGGCGCT GGAGATCGCG GGCCTGGGCA AGGCGGTGCA CCGCAAGGTG
CGCACCTACA GCCAGGGCAT GAGGCAGCGG CTCGCGATCG CCCAGGCGAT GCTCGGGCTG
CCGGACCTGC TGGTGCTGGA CGAACCCGCC AACGGGCTCG ACCCGCCCCA GATCCACGCC
ATGCGCGACG TGCTGCGGCG GTACGCGGCG GCCGGTCGCA CGGTGCTGGT GTCCAGCCAC
CTGCTCGCCG AGGTCGAGCA GACGTGCAGC CACGTGGTGG TCATGCACAA GGGCGCCCTG
GTCGCGGCGG GTCCGGTCGA GGAGATCGCG ACCGGCAGCG GCGAGGCCAC CTTCCGGGTC
GACCGGCCCG AGGAGGCGGC GGAGGTGCTG CGGTCCCTCG ACGGGGTGCT GGAGGTCCAG
GTCGACGGCG AGCAGGTGCA CGCGGCGCTG AACGGCACCC CGCGCGCCGA GGCGCTGCAG
GCGCTGGTGG CGGCCGGGGT CTCGGTCGAC CAGGCCGGGC CGCGCAGGCG GCTCGAGGAC
GCGTTCCTGG AGTTGGTGGG CGAATGA
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| Protein sequence | MAIPSRLRGR WSLPALVVLV ALVGGVVVWT RGGDDPPQVH TRDAVIDVPE APGSDRALQI
DTTLYLPEKT PAPAILLPHG FGGSKNSVAT EATELAQRGF VVLTYSARGF GRSTGQISLN
SVDHEVNDAK RLLDWLATRQ EVMTDAPGDP RVGVTGGSYG GALALSLAGV DPRVDTIAPT
ITFNDLASAL LPNHGATGEA VDTRTPTPGP SGDAGVFKRS WSGLFFSAGL GGGNMSGPTQ
EAPEAGQDDD QQVGAAATAA PEGSTAEGSA TGQPGQGQQP GQGRGAAPLN GTCGRFAEDV
CAAYNEIATT GTAGQASLDV LRRGSPSELT GRITQPTMIV QGEQDTLFGL DQADANARQI
AATGAKVKVV WYAGGHDGGS PGPELRGQIA DWMDFHLNGA GTDPGTTFQY AVQGAFRSSG
SVALRDVVAP AYPGLGGQAA VNRQDVALTG REQAVINPAG GNPASVSSLP GLGAAVSRSS
SLSSRLTIDM PGQTAVFTSE ALTSQLLVTG ASTVRLKIAA VPGQAVPEGG AVLFAKLYDA
DANGGKVLPG SAVAPFRVPE LPADGTPVEV SVSLPGVVRP VESGHRLQLA VSTTDQAFAN
AQEPAVYRIA LADGDTGNVR VPVVTGSNRV SEVPADALWG IAGVLALSAV AAVVAWFRRR
LATDLDPELA EVPLVIKGLK KSYPGGLTAV NDLSFRVEHG QVLGLLGPNG AGKTTSLRML
MGLIQPSEGE IRVFGHRITP GAPVLSRIGS FVEGSGFLPH LSGKANLELY WSATGRPLEQ
AHFDEALEIA GLGKAVHRKV RTYSQGMRQR LAIAQAMLGL PDLLVLDEPA NGLDPPQIHA
MRDVLRRYAA AGRTVLVSSH LLAEVEQTCS HVVVMHKGAL VAAGPVEEIA TGSGEATFRV
DRPEEAAEVL RSLDGVLEVQ VDGEQVHAAL NGTPRAEALQ ALVAAGVSVD QAGPRRRLED
AFLELVGE
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