Gene Amir_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5508 
Symbol 
ID8329714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6540197 
End bp6540853 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content73% 
IMG OID644945948 
ProductRES domain protein 
Protein accessionYP_003103172 
Protein GI256379512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.679313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGGC TTCCCCAGCC GCCCGCCCCC GCCGTGCTGC AGGCCAACCT GCGGCGCACC 
GAGGACGTCG TGGCGGTGCA CCAGGCCACC CGGCTGGTGC GGATCTTCAC CGCGAAGGGG 
CTGCACCCCC AGCGGTGGAA CAGCTTCCGC TACACCGGAC CGCTGCCGCA CGCCCGCTTC 
GACACCCAGC CGCCGGGACC CGGCGGTGAG CTGACGCACG ACCAGGACCA GGGCGTGCTG 
TACTTCGGGC TCACCGTCCG GACCTGCGTC GCCGAGGTGT TCCAGGCGAC GTCGGTGGTG 
GACCGGCGCA CCCGCAGCCC GTTCCTGGTG GTGCTGCGCC CCAAGCGGAC CCTGCGGCTG 
CTCGACCTGA CCGGCCTGTG GCCGACCAGG GTCGGGGCGT CGCAGGAGAT CAGCTCCGGA 
CCCAAGGTGA TCACCCAGGC GTGGGCGCGC ACCATCCGCG CGGCGTACCC CGAGCTGGAC 
GGCCTCTGGT ACCGCTCGTC CATGGACGGC GGCAACGAGG CCGTGTGCCT GTGGGACCCG 
CCGGGCGGCT CGGGGCTGCC CGCCTCGCCG GACGTGCTGC TGCCCCTGGA GCACCCCGGA 
CTCGACCTGC CGCTCGCCAG GGTGTGCGAG GAGCTGAACT ACACCCTGCT GAACTGA
 
Protein sequence
MSRLPQPPAP AVLQANLRRT EDVVAVHQAT RLVRIFTAKG LHPQRWNSFR YTGPLPHARF 
DTQPPGPGGE LTHDQDQGVL YFGLTVRTCV AEVFQATSVV DRRTRSPFLV VLRPKRTLRL 
LDLTGLWPTR VGASQEISSG PKVITQAWAR TIRAAYPELD GLWYRSSMDG GNEAVCLWDP 
PGGSGLPASP DVLLPLEHPG LDLPLARVCE ELNYTLLN