Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5506 |
Symbol | |
ID | 8329712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6537318 |
End bp | 6538505 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644945946 |
Product | hypothetical protein |
Protein accession | YP_003103170 |
Protein GI | 256379510 |
COG category | [S] Function unknown |
COG ID | [COG5650] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.344164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGGAAC GACCGGACAA GCGGCTGCTG GGCGTGTGGG CGGTGGCGGC CGTCGCGCTG CTCGTCATCG TCCACCAGCG CTCCAGCGAG GGCCTGCTCG ACCTGCGGGT CTACCGCACG GGGGGAGAGG CCTGGCTGCG CGACCTCCGG CTGTACGCCG ACGACTTCCC CAAACCCCTG GACGGCCCGC CGTTCCCCTT CACCTACCCG CCGCTCGCCG CCGCGATCTT CAGCCTCTTC GCGCTGGTCC CGTTCCCCGC CGCGGTTCTG GTGTGGACGA CGCTCGGCCT GGTGCTGCTG CTGGTGGTGT GCGTCCTCTC CGCCTGGCAC CTGTACGGGG ACGCGCGCCG CGCGCTGCTC GTCGGCGTCA TCGTCTCCAT CGGCGCGCTC GTGCTGGAAC CGGTGTGGGC CACCTTCGAC TTCGGCCAGA TCAACCTGGT CATCATGGGC CTGGCCGCGC TGGACTGCCT GCTGCCGCGC ACCCGCTGGC CCAGGGGCCT GCTGATCGGC TTCGCCGCCG CGATCAAGCT GACGCCCGCC GTGTTCGTGC TGTTCTTCCT GGCGCGCGGC AGGTGGAAGC CGGTCCTCAC CGCCGTCGCC TCGTTCGTCG GTTTCGGACT CGTCGGCGCG GTCGTCGCGT TCGAGGACAC CAAGCAGTAC TGGTTCCACA CCCTGCTCGA CCCCGCGCGC ATCGGTGAGC TCGGCTACGC GGGCAACCAG TCGCTGCGCG GCCTGGTCAA CCGCCTCGGC CTGACCGGCG CCGCCGAGTC CGTGGCGTGG CTGCTGCTGT CGCTGGGCGT CGCGGCCCTC GCCTGGGTCG CGGTGCGCCG GGCGCGCGAG GACGTGTCCG CGCTGCTGGC CGTGTCGATC GCGGCGCTGC TGGCGTCCCC GGTGTCCTGG ACGCACCACT GGGTGTGGGT CGTGCCCGGC CTGGTGCTGC TGGTGGGGCA GCGCTCCGTC GCGGGCTGGG TGACGCTGGT GCTGGTCGCC GACCTGTTCG TGTGGGCCCC GCTGTGGCTG CTGCCGCACG ACAAGGGCGT CGAGGTCGGC TGGAACGCGT GGCAGCAGCT CGTCGGCAAC TCCTACGTGC TGGTCGCGGT GGCGGCGCTG GTGTACCTGG CGGTCCGCAA GCCCGCTCCC GTCACGAGGC TGGAACCGGA CGTCGCACCG GTCGCCACCG ACCGCTGA
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Protein sequence | MVERPDKRLL GVWAVAAVAL LVIVHQRSSE GLLDLRVYRT GGEAWLRDLR LYADDFPKPL DGPPFPFTYP PLAAAIFSLF ALVPFPAAVL VWTTLGLVLL LVVCVLSAWH LYGDARRALL VGVIVSIGAL VLEPVWATFD FGQINLVIMG LAALDCLLPR TRWPRGLLIG FAAAIKLTPA VFVLFFLARG RWKPVLTAVA SFVGFGLVGA VVAFEDTKQY WFHTLLDPAR IGELGYAGNQ SLRGLVNRLG LTGAAESVAW LLLSLGVAAL AWVAVRRARE DVSALLAVSI AALLASPVSW THHWVWVVPG LVLLVGQRSV AGWVTLVLVA DLFVWAPLWL LPHDKGVEVG WNAWQQLVGN SYVLVAVAAL VYLAVRKPAP VTRLEPDVAP VATDR
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