Gene Amir_5447 details

Gene Information

• Locus tag: Amir_5447
• ID: 8329653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6473611
• End bp: 6474132
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644945888
• Product: putative signal transduction protein with EFhand domain
• Protein accession: YP_003103112
• Protein GI: 256379452

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAGTG ATCTGCAGAA GCGGAAGATG TCCGCGGTCT TCGGCGCGAT GGACGCCAAC 
GGGGACGGCA AGCTGGAGAA GGCCGACTTC GACGCGCTGA CCACGCGGTG GCTCGCGGTC 
AGCCGGGACG CCGACGCCGG GGTGCTGCGC TCGACCATGG ACCAGTGGTG GACCGTGCTG 
CGCGAGGCGT CGGACCACAA CGACGACGAC GAGGTCACCC TGGACGAGGT GATCGCGGCG 
GCGGGCGACC AGATGCTGAT GCTGGACCTG GTCGTGTCGA CCGCCGAGGC GATGTTCGAG 
GCCGTGGACC TGGACGGCAG CGGGTCGGTC ACCGCGCAGG AGTACGCGAC GATGATCCAC 
GCCTGGACCG GGAACGACGC GTCGACCGAC GAGGTGTTCG CGCTGCTCGA CCTCGACGGG 
AACGGGGAGC TGTCCAAGTC GGAGTTCGCC CGGCACTGGG TGGAGTTCTG GGCGGGCGAC 
GACCCGGACG CGCCCGCGAA CAACGTGTTC GGGCTGATCT GA 

 

Protein sequence

MASDLQKRKM SAVFGAMDAN GDGKLEKADF DALTTRWLAV SRDADAGVLR STMDQWWTVL 
REASDHNDDD EVTLDEVIAA AGDQMLMLDL VVSTAEAMFE AVDLDGSGSV TAQEYATMIH 
AWTGNDASTD EVFALLDLDG NGELSKSEFA RHWVEFWAGD DPDAPANNVF GLI