| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5431 |
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| Symbol | |
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| ID | 8329633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6447935 |
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| End bp | 6448834 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945868 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003103096 |
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| Protein GI | 256379436 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.060431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGGCG TGACCCCCGC CGACGCGGTC ACGGCCTACC TGGACCACCT GGCGGTCGAG
CGCGGCGCCG CCCGCAACAC CCTCGACTCC TACGCCCGCG ACCTGCGGCG CTACCTCGCG
CACCTGGAGT CCGCCGGTCT CGGGCTGGAC GCGGTCACCG AGGCCGTCGT CGGCGACTTC
CTCGCCGGGC TGCGGGAGAG CGGCCTGGCG GCCTCGTCGG CCGCGCGGAC CCTCGTCGCC
GTGCGCGGGC TGCACCGCTT CGCGCACCGC GAGGGGCTCA CCGCCGCGGA CCCGGCCAAG
GACGTGCAGC CGCCCGCCGC GCCGCGCAGG CTGCCGAAGG CGCTGCCCGT CGCCGACGTG
CTGCGGCTGC TCGACACCGC GGGCGACACC CCCGCCGCGC TGCGCGACCG GGCGCTGCTG
GAGCTGCTCT ACTCGACCGG AGCGCGGATC TCCGAGGTGG TCGGGCTCGA CGTGGACGAC
GTCGACGCGG CCGAGCGCAC CGCGCTGCTC GACGGCAAGG GCGGCAAGCA GCGCGTCGTC
CCGGTGGGGC GGCCCGCGCT CGCGGCCGTG GAGGCGTACC TGGTGCGGGC GCGGCCGGTG
CTGGCCAAGC GCGGCGGACC CGCGCTGTTC CTCAACGCCA GGGGCGGGCG GCTCAGCAGG
CAGAGCGCGT GGCAGGTGCT CAAGACCGCC GCCGAGCGGG CGGGCGTGGC CGCCGAGGTG
TCCCCGCACA CGCTGCGGCA CTCGTTCGCC ACGCACCTGC TGGAGGCGGG CGCGGACGTG
CGCGTGGTGC AGGAGCTGCT CGGGCACGCC TCGGTGACCA CGACGCAGGT GTACACGCTG
GTCACGGTGA CCACGCTGCG GGAGGTGTAC GCGACGGCCC ACCCCAGGGC CACCGGGTGA
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| Protein sequence | MPGVTPADAV TAYLDHLAVE RGAARNTLDS YARDLRRYLA HLESAGLGLD AVTEAVVGDF
LAGLRESGLA ASSAARTLVA VRGLHRFAHR EGLTAADPAK DVQPPAAPRR LPKALPVADV
LRLLDTAGDT PAALRDRALL ELLYSTGARI SEVVGLDVDD VDAAERTALL DGKGGKQRVV
PVGRPALAAV EAYLVRARPV LAKRGGPALF LNARGGRLSR QSAWQVLKTA AERAGVAAEV
SPHTLRHSFA THLLEAGADV RVVQELLGHA SVTTTQVYTL VTVTTLREVY ATAHPRATG
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