Gene Amir_5412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5412 
Symbol 
ID8329614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6427591 
End bp6428805 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content75% 
IMG OID644945849 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003103077 
Protein GI256379417 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCGCGA AAACGTTTGC GGCACCGGAC CGGTCCGCGC TGTACACCGC CGCTTTCGAC 
GAGGCGATCC GGTCGGGCAA GGACGTCGCG CTGCACCCGG AGAAGGGTCG GGAGTTCCTC
TACCGGCCAG GACAGCTGCT GACGATTCCC GAGGACGCCG CGCGGGTGAT CGAGAAACTG
CGCCGCAGCG GGTTCGCCGT GGAACGGGGC CGCGAATTCG CGGGAATGGT CCGGCTGCTG
CTGGAGAACA ATTCCCGCGA CATCCCCGCA ATAGTGCGGC TGCTGCGGGA CCCCGCCACC
TGGCCGGGTG AGCGGACCCC GTTCACCCAA CCGCACCACG TGTCCGTCGG GCACGGCGGC
AACATGCACG GGCACCCCGG CGGACCGCCG CGCGTGGCGA CCGCGCTGCC CGACCCGGAC
CCCGGCGACG GGCGCGGCCG GGGCGTGGTG GTGGCGGTGC TGGACACCGG CATGTCCGCG
ACGGCCGGGG CGGACCACCC GGCGTGGCTG GGCGGCTCCT TCACCCCGCG CGCCGACGAG
GTGGACGCGG CCTACGCGCA CGACGACGTG TTCGCGCTGG AGGGCGGGCA CGGCACGTTC
GCGGCCGGGG TGGTGCGGCA GGCCGCGCCG TCGGTCCGGG TCGACCCGGA GCGCGCGCTG
CTGCCGTCCG GGCTGGGCGA CGAGGAGATG TTCGCGGCGG CGCTGGCCTC GTTCGACGAG
CGGCCGGTGC ACGTGGTGAA CGCGTCGCTG GGCTGCTCCA CGCAGGACGA CGTGGCGTCC
GAGCCGATGC GGCGGGCGCT CGCGGCGCTG CAGAAGGACG TGGTCGTGGT GGCGTCGGCG
GGCAACCAGG GCACCACCCG CCCGTCGTGG CCCGCCGCGC TGCCGGGCGT GGTCGGGGTG
GCGGCGATCG CCGAGGAGCG GGACGGGACG CGCTCCCCCG CCTGCTACAG CAACCACGGG
CACTGGGTGG ACGCCTGCGC GGTCGGCAAC CGGACCTCCA CGTACCTCAA GGGCAAATGG
GTGCTGCCGG GCGACCCGGC CGTCGACGTG TTCGACCGGT GGGCGTACTG GCTGGGCACC
TCGTTCGCGG CCCCGCACGT GTCCGGGCGG ATCGCGGCGA CCATGACGCA GCTCGGCCTG
ACCGCGCTCC AGGCCCGCGA CCACCTGCTC GCGGGGGCCG AGTTCTTCCC CGGCTACGGG
GTCGCGGTCG GCTGA
 
Protein sequence
MSAKTFAAPD RSALYTAAFD EAIRSGKDVA LHPEKGREFL YRPGQLLTIP EDAARVIEKL 
RRSGFAVERG REFAGMVRLL LENNSRDIPA IVRLLRDPAT WPGERTPFTQ PHHVSVGHGG
NMHGHPGGPP RVATALPDPD PGDGRGRGVV VAVLDTGMSA TAGADHPAWL GGSFTPRADE
VDAAYAHDDV FALEGGHGTF AAGVVRQAAP SVRVDPERAL LPSGLGDEEM FAAALASFDE
RPVHVVNASL GCSTQDDVAS EPMRRALAAL QKDVVVVASA GNQGTTRPSW PAALPGVVGV
AAIAEERDGT RSPACYSNHG HWVDACAVGN RTSTYLKGKW VLPGDPAVDV FDRWAYWLGT
SFAAPHVSGR IAATMTQLGL TALQARDHLL AGAEFFPGYG VAVG