| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5411 |
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| Symbol | |
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| ID | 8329613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6424892 |
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| End bp | 6427513 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 81% |
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| IMG OID | 644945848 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003103076 |
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| Protein GI | 256379416 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.710354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGTGG TTTCCGCTTC GGCGGCCCTG GAAGCGCGGC AGCGGGACCC GCGCGCGGCC
ATCGGGCTCG GGCGCGCGGC GCTGGCCGCC GCGCGGGCGT CCGGCGACCT GGCCGAGGCG
TCGGCGGCCG AGCGCGCGAT CGGCCTGTCC CTGCGCGAGC TGCACGACTT CCCCGGCGCG
CTGCGGCACC TGCGCCGCTC GGTGCGGCTG GCCCGCGGCG CCGGGTCGGA CCGGCTCACC
GCACTGGCCC GGCTCAGCCT GGCGTTCGCG CTCTCCAGCA CCGGCAGGCA CGCCCAGGCG
CTGCGGGCGG TGGAGCAGGC GCTGCCCCGG CTGCGCGGCG GCGACGCGGA CATCGCGGTC
ATGCAGCGCG GCACGGTCCT GCACTTCCTG TGCCGCTACG ACGAGGCGCT GCGCGACTAC
GACGCGGCCA TCGACGCCGC CCGCCGCACC GGCGACCACC TCGGCGAGGC CCGCGCCCGC
AACAACCGGG GCCTGCTGCG CGCCTACACC GGCGGGCTGC GCGCCGCCGA CGAGGACTTC
GACCGGGCCG CCGCGCTCTA CCGGGAGCTG GGCCTGGAGC TGGCGGTGGC GGACGTGCGG
TGGAACGCCG GGATCTCCGC CCAGCGCGCC GGCGACGTGC CGGGCGCGCT CACCGCGTTC
GCCGACGCCG AGCAGGAGTA CCGGCGCCTG GCGGTGCCCC GGCCGATGCT GCTGGTCAAC
CGCCTGGAGC TGCTGGTGTC GGTGCCGCTG CTGGAGGAGG CCCGCGCCGA GGCCGACCGG
GCCGTCGCCG ACCTCGCCGA CCACCCCGAC TTCGCCCTCG GGCGCGCCGA GGCCGAGTTC
TACCGGGCCC GCGTCGCCCT CCTGGAAGGC GACGCGGACA CCGCCGCCGA GGTCGCCGAC
CGGGCAAGGC GCGCCTTCCA CCGCCAGGGC CGCGACGTGT GGGCGGCCTC CGCCCGGCAC
GTGGGCCTGC GCGCCGCCTA CCTCGGCGGT CGGCGCGACC GGGCGCTGCT GACCGCGATG
GCCCGCATCG CCGACCGGCT CGACGCGCTG GGCTGGCGGG TGGCGGGCCT GGAGGCCAGG
GTGGACGCGG CGCTGATCGC CCGCGACCTC GGCGACACCC GCCGCGCCGC CGCCGAGCTG
GCACTCGCCG CGCCCGCCCG CCGCTCCGGC CCGGCGCAGG CGCGGGCGCG CGGCTGGTAC
GCCGAGGCGC TGCGGCGCGA GCTGGCCGCC GACCGGCGCG GGGCGGCGGT GGCGCTGCGG
CGCGGGCTGG CGCTGCTGGA CGAGCACCGG CTGTCGCTGG GCGCGGGGGA GCTGCGCGCG
CTGTCCGGGG CGCACGGGCA GGACCTGGCG CGCGCCGGGC TGCGGCTGGC GCTGACCGGC
GGGGCCGGGG CGCGGCAGGT GCTGGCGTGG GCGGAGAGCT GGCGGGCGGG CGCGCTGCGG
ATGACCCCGG CCCGGCCGCC CGAGGACACC GGGCTCGCCG ACGCGCTCAC CGAGCTGCGC
GCGGTCACCG CCGACCTGGA GCGCGCCCTG CTGGAGGGGC GGCCCGCCGG GGCGCTGCGG
CAGCGGCAGA CGCGCGGCGA GCAGCGGGTG CGCGAGCTGA CCAGGCGCGG TGGTGGCGGC
GGGCGGCTGC TGCGCCCGCC GACCGTGCCG GAGCTGGCCG ACGCGCTCGG GGACGCCGCG
CTGGTGGAGT ACATCGGCTC GGAGGGCGAC CTGCTGGCCG TGGTGGTCGC GGGCGGCCGG
GCCTCGCTGC ACCGGCTGGG CGCGCTGGAC GACGCGGCCC GCGAGGTGCG GCTGCTGCGG
TTCGGGCTGC ACCGGCTGGT GACGCTGCCC GCGCGGGTCG ACCGGTCCGG CGGCCGGGCA
GGCGTCGACC ACGCCGCCGG GCGGCTGCGC AAGCGGTTGC TGGACCCCCT CGAACGGCGC
GTCGACGGGC GCGACCTGGT GCTCGCCCCC ACCGGCGCGC TGGGCGGCCT GCCGTGGGCC
GCGCTGCCCG GTCTGCTCGG CAGGCCCACC GTCGTCACGC CCTCCGCCGC CGTGTGGCTG
CGCGCTGCGA CCTCCGGCGC GCCCGCGCCG GGCCGGGCCG TGCTCGCCGC CGGTCCCCGG
CTGCCCGCCG CGCGCGGCGA GGTCGACGCG GTGGCCGCGC TGACCGGGGA CGCGCTGGTG
CTGGTGGGGG AGGGGGCGAC GGTCGACGCG GTCGCGGCGG CCATCGACGG CGCGCCGCTC
GCGCACGTGG CCGCGCACGG CACCTTCCGC GCGGACAACC CGCTGTTCTC CGCGCTGGAG
CTGGCGGACG GCCCTCTCAC CGGCTACGAC CTGCAGCGGC TCGCCGCCCC GCCCGCGCGG
GTGGTGCTGT CGGCCTGCGA CTCGGGGCTG TCGGCGGTGC GGCCGGGCGA CGAGCTGCTC
GGGTTCACCG CCGCGCTGCT CGGCGCGGGC ACCGGGGCGC TCGTCGCGCC GGTCGTGCCG
GTGCCCGCCG AGGAGACCGC GCCGCTGGTG GTCGAGCTGC ACCGGGGCCT GCGGGACGGG
CTGCCGCCCG CGACCGCGCT CGCGCGGGCG CAGGCCGCGC ACGCCGGGCT CGGTGATCTG
GAATTCGCGG CGGGGGCGGG GTTCCTGTGC TTCGGCGCGT GA
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| Protein sequence | MSVVSASAAL EARQRDPRAA IGLGRAALAA ARASGDLAEA SAAERAIGLS LRELHDFPGA
LRHLRRSVRL ARGAGSDRLT ALARLSLAFA LSSTGRHAQA LRAVEQALPR LRGGDADIAV
MQRGTVLHFL CRYDEALRDY DAAIDAARRT GDHLGEARAR NNRGLLRAYT GGLRAADEDF
DRAAALYREL GLELAVADVR WNAGISAQRA GDVPGALTAF ADAEQEYRRL AVPRPMLLVN
RLELLVSVPL LEEARAEADR AVADLADHPD FALGRAEAEF YRARVALLEG DADTAAEVAD
RARRAFHRQG RDVWAASARH VGLRAAYLGG RRDRALLTAM ARIADRLDAL GWRVAGLEAR
VDAALIARDL GDTRRAAAEL ALAAPARRSG PAQARARGWY AEALRRELAA DRRGAAVALR
RGLALLDEHR LSLGAGELRA LSGAHGQDLA RAGLRLALTG GAGARQVLAW AESWRAGALR
MTPARPPEDT GLADALTELR AVTADLERAL LEGRPAGALR QRQTRGEQRV RELTRRGGGG
GRLLRPPTVP ELADALGDAA LVEYIGSEGD LLAVVVAGGR ASLHRLGALD DAAREVRLLR
FGLHRLVTLP ARVDRSGGRA GVDHAAGRLR KRLLDPLERR VDGRDLVLAP TGALGGLPWA
ALPGLLGRPT VVTPSAAVWL RAATSGAPAP GRAVLAAGPR LPAARGEVDA VAALTGDALV
LVGEGATVDA VAAAIDGAPL AHVAAHGTFR ADNPLFSALE LADGPLTGYD LQRLAAPPAR
VVLSACDSGL SAVRPGDELL GFTAALLGAG TGALVAPVVP VPAEETAPLV VELHRGLRDG
LPPATALARA QAAHAGLGDL EFAAGAGFLC FGA
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