Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5399 |
Symbol | |
ID | 8329601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6414838 |
End bp | 6415569 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644945836 |
Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
Protein accession | YP_003103064 |
Protein GI | 256379404 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.189435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCGG TAATGGACTT CCAACCGTTG TTCCGCGAGT TGGCCGAGGC GCAGTCGCGC GTCGAACGCC GCCAGGAGCT GCGGGACCAG CTGGTGACGG AGTACCTGCC GGTCGCCTGG CACATCGCCG ACCGGTTCGC CGAGCGCGGC GAGTCGGTGG AGGACCTGCG GCAGGTGGCC GCCGTGGGCC TGATCCACGC GGTGGACCGG TTCGACGTGC AGCGCGGCAT CGACTTCCTC GCGTTCGCCG TCCCGACCAT CACCGGCGAG GTGCGCCGCC ACCTGCGCGA CCAGGGGTGG GCGGTGCGGG TGCCGCGCAG GCTCAAGGAG CTGTGCCTGG CCATCGACGC CGCCCGCGTC GAGCTGGCCC GCGCGAGCGG TCGCACGCCG ACGCCGAGCG AGGTCGCCAG GCACCTGAAC CTCTCGCTCG CCGAGGTCTA CGAGGGGCTG CACGCCACCT CCGCCAACCA CATGGTCTCC CTGGACGAGG TGGACTCCGA CCACCGCCTG GGCGTCGACG ATCCGGCTCT GGAGGTGGTC GAGCTCCAGC ACGCGCTTGA TCCGATGCTT CGCGGGCTAC CCAAGAGGGA GCGGAGGATC GTGCTGCTGC GGTTCTTCAG GAACATGACG CAGAGCCAGA TCGCCGACTC GGTGGGCGTG TCGCAGATGC ACGTGTCGCG CCTGCTGAGC CGGTCGCTCG CCCGCCTGCG GGACCTGCTC GACGAACGCT GA
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Protein sequence | MSAVMDFQPL FRELAEAQSR VERRQELRDQ LVTEYLPVAW HIADRFAERG ESVEDLRQVA AVGLIHAVDR FDVQRGIDFL AFAVPTITGE VRRHLRDQGW AVRVPRRLKE LCLAIDAARV ELARASGRTP TPSEVARHLN LSLAEVYEGL HATSANHMVS LDEVDSDHRL GVDDPALEVV ELQHALDPML RGLPKRERRI VLLRFFRNMT QSQIADSVGV SQMHVSRLLS RSLARLRDLL DER
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