Gene Amir_5381 details

Gene Information

• Locus tag: Amir_5381
• ID: 8329583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6395330
• End bp: 6397264
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644945818
• Product: hypothetical protein
• Protein accession: YP_003103046
• Protein GI: 256379386
• TIGRFAM ID: [TIGR02243] conserved hypothetical protein, phage tail-like region

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCTGC CCAGCCCCAA CCTGGACGAC CGCCGCTTCC AGGACCTGGT CGACGAGGCC 
AAGCGCCGCG TCCAGCAGCA CTGCCCGGAG TGGACGGACC ACAACGTGTC CGACCCCGGC 
GTCACGCTGA TCGAGGCGTT CGCGCACATG ACCGACGAGC TGCTCTACCG GCTCAACCGC 
GTCCCCGACC TGCACTACCT GCGGTTCCTG GACCTCATCG GCGTCACCCT GTTCCCGCCC 
GCCGCCGCCC GCGCCGACGT GACGTTCTGG CTGTCCGCGC CGCGCGAGAC CCCCGTCGTG 
GTCCCGGCCG GGGCGCAGGT CGCCACCGAG CGCACCGAGA TCGAGGAACC GGTGGTGTTC 
ACCGTCGACC GCGACCTCGT CGTCGTGCCC GCCACCCTCG CCGCGCTGGC CACCTCGGCG 
GCCGACGCGC CCCCGGTCGA CCGCACCGAC GACCTGCGCG ACGGCAAGGA CCCCGAGGTG 
TTCGCCACCG AGCCGACCGA GGGCGACGCG GTGCTGTTCG GCCTCACCGA CGCCGTCCCC 
GGCTGCGCCG TGCTGCTGCG CCTGGAGTGC CGCGCCGAGG GGCGCGGCGT CGACCCGCGC 
TTCCCGCCGT GGACGTGGGA GGCGTGGGAC GGCGAGGCCT GGACCCCGGC CGAGGTCGAG 
CGGGACAGCA CCGGCGGCTT CAACCAGCCC GGCGACGTCG TCCTGCACGT CCCGGCGGGC 
CACACCGCCT CCGTGATCGC CCGGCAGCGC GCCGGGTGGC TGCGCTGCCG CGCCGTGCGC 
CCCGAGCCGG ACCTGCCCTT CTACCACCGG TCCCCGAGGC TGCTGTCCGC CACCGCCGCC 
ACCGTCGGCG GCACCACCTC CGCCACCCAC GCCGACGTGG TCACCGGCGA GGTCGTCGGC 
GTCTCCGAGG GCGTGCCCGG CCAGCGGTTC CAGCTCGCCC GCACCCCCGT CGTCGTCGGC 
GACGGGGACC TGCGCGTGCA GGTCGCCACC GCCGACGGCT GGCAGGACTG GCACGAGGTG 
CGCTCGTTCG CCGAGTCCGG CCCCGCCGAC CGGCACGTCG TGCTCGACCG CGTCGGCGGC 
GAGCTGATCT TCGGACCGGC GGTGCGGCAG CCCGACGGCT CGGTGCGCAA CCACGGCGCG 
GTGCCGGTCA AGTCCGCCGC GATCCGCGTC CCCGAGTACC GCACCGGCGG CGGCCTGCGC 
GGCAACGTCG CGCGCGGGAT GCTGCGCGTG CAGCGCGACC CGGTGCCGTT CGTCAGCTCC 
GCCACCAACC GCAGGCCCGC CGCGGGCGGC GTGGCGGGGG AGAGCGTCAC CGACGCCGCC 
CAGCGCGGCC CGCTGCTGCT GCGCACCCGC GACCGGGCCG TCACCGCCGA GGACTACGAG 
CTGCTCACCC GCGAGGCCGC GCCCGAGATC GCCCGCGTGC GCTGCGTCCC GGCGGGCGCC 
GGGTCGGACG CGGTGCGGGT GCTCGTGGTG CCCGCCGTGC ACGCCGACGA GGGCGCGGAC 
TTCGCCGCCC TGCAACCGGA CGCCGAGGTG CGGGGCCGCA TCGAGCGGTT CCTGGACGAG 
CGGCGCTGCG TCGGCGCGCG CGTCTCCGTC GAACCGCCCT TCTACCAGGG CGTCACGGTC 
GTCGCGCAGC TGCGCGCCCG CGCCGGGACC CCCGAGGACG TGCTGCGCTC GCGCGCCGTG 
CAGGGCCTCT ACGACTACTT CAACCCGATC AGCGGCGGAC CCGACGGCGG CGGTTGGCCG 
TTCGGCAGGC CCGTGCAGTC CGGCGAGGTC TTCGCGGTGC TGCAACGACT TCCCGGCGTC 
GAGCTGGTGG AGGACATCCG GCTGTTCGGC GCGAACCCGG TCACCGGCGA GCGCGGCACC 
GCCGTCCCGC GCCTGGACCT GCCGCCCAAC GGCCTCGCGT TCTCCTACGG CCACCAGGTG 
CGGGTGGCCC GATGA 

 

Protein sequence

MPLPSPNLDD RRFQDLVDEA KRRVQQHCPE WTDHNVSDPG VTLIEAFAHM TDELLYRLNR 
VPDLHYLRFL DLIGVTLFPP AAARADVTFW LSAPRETPVV VPAGAQVATE RTEIEEPVVF 
TVDRDLVVVP ATLAALATSA ADAPPVDRTD DLRDGKDPEV FATEPTEGDA VLFGLTDAVP 
GCAVLLRLEC RAEGRGVDPR FPPWTWEAWD GEAWTPAEVE RDSTGGFNQP GDVVLHVPAG 
HTASVIARQR AGWLRCRAVR PEPDLPFYHR SPRLLSATAA TVGGTTSATH ADVVTGEVVG 
VSEGVPGQRF QLARTPVVVG DGDLRVQVAT ADGWQDWHEV RSFAESGPAD RHVVLDRVGG 
ELIFGPAVRQ PDGSVRNHGA VPVKSAAIRV PEYRTGGGLR GNVARGMLRV QRDPVPFVSS 
ATNRRPAAGG VAGESVTDAA QRGPLLLRTR DRAVTAEDYE LLTREAAPEI ARVRCVPAGA 
GSDAVRVLVV PAVHADEGAD FAALQPDAEV RGRIERFLDE RRCVGARVSV EPPFYQGVTV 
VAQLRARAGT PEDVLRSRAV QGLYDYFNPI SGGPDGGGWP FGRPVQSGEV FAVLQRLPGV 
ELVEDIRLFG ANPVTGERGT AVPRLDLPPN GLAFSYGHQV RVAR