| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5363 |
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| Symbol | |
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| ID | 8329565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6376695 |
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| End bp | 6377501 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945800 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_003103028 |
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| Protein GI | 256379368 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.583087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCGG CTGAAGGGGG CGCCACGAAG GCGGCGTCGG GCAAGTCGAG CAGCCAGGGC
GACTACGACC ACCTCGCCCC GCTGTTCACC CGGCTCGCCC AGACCCCGGC GAGCGACCCG
GCGCGCGAGC GGCTGCGGGA CGAGCTGGTC ACCGAGCACC TGCCGGTGGC CAGGCACATC
GCGCGCCGGT TCGGGCACCG GGGCGAGCCC CACGACGACC TGGTGCAGGT GGCCACCGTC
GGGCTGATCA ACGCGGTCGA CCGGTTCGAC CCGGAGCGCG GCAGCGACTT CCTGTCGTTC
GCGGTGCCGA CGATCATGGG CGAGGTGCGG AAGTACTTCC GCGACTCGTC CTGGTCGGTG
CGGATGCCGC GCAGGCTCAA GGAGCTGCAC CTGGCGATCA ACGCCGGGTC GGCGCGGCTG
TCGCAGGAGC TGGGCAGGGC GCCGACGCCC AGCGAGCTGG CGCAGCACCT GGGCCTGAGC
CGCGAGGAGG TGCACGAGGG GCTGGCGGCG GGCAACGCCT ACCACAGCGC CTCGCTGGAC
GACCTGCTCG TGGCCGACGA CAGCTCCATC TCGCTGGGCA GCACGCTCGG CGAGGAGGAC
CCGGAGCTGG AGGCGATCGA GCAGCGCGAG TCGCTGCACC CGCTGCTGGA GAAGCTGCCG
GAGCGGGAGC GGCGGATCGT GGTGATGCGG TTCTTCGGGA ACATGACGCA GACCCAGATC
GCGCAGAAGG TCGGCATCTC GCAGATGCAC GTGTCGCGGC TGCTGGCCAA GACGCTGCGG
CAGCTGCGGG ACGGGCTGGA GCAGTAG
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| Protein sequence | MTAAEGGATK AASGKSSSQG DYDHLAPLFT RLAQTPASDP ARERLRDELV TEHLPVARHI
ARRFGHRGEP HDDLVQVATV GLINAVDRFD PERGSDFLSF AVPTIMGEVR KYFRDSSWSV
RMPRRLKELH LAINAGSARL SQELGRAPTP SELAQHLGLS REEVHEGLAA GNAYHSASLD
DLLVADDSSI SLGSTLGEED PELEAIEQRE SLHPLLEKLP ERERRIVVMR FFGNMTQTQI
AQKVGISQMH VSRLLAKTLR QLRDGLEQ
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