| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5361 |
|---|
| Symbol | |
|---|
| ID | 8329563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6375305 |
|---|
| End bp | 6376102 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644945798 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_003103026 |
|---|
| Protein GI | 256379366 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC AACTCGCCGA CCGGCACTGG CGGGCGGAGT TCCCCGCCGA GCCGGCAAGG
CTCTCGGCCC TTCGACAGCG CGTCGACCGG TGGCTCGCCG GTCTCGGCGT CGAGCAGGAC
GACCGCTACG ACCTGCTGAT GGCTGTCAAC GAGGCCGTCA GCAACTCCAT CGAGCACGCC
TACCCGCCGG GCTCGCCCGG CAGCGTGCGC GTCGAGGCGA CCGTCGAGCC GGACGGTCGC
GTCAGGGTGG TCGTCGCCGA CGACGGGCGC TGGCGCGTCC CGCCGCCGGG GCTGTCGTCC
AGGGGGCGCG GCCTGCTGCT GATGCGCGAG AGCGTGGACG AGGTGCTGCT GGACCGGTCG
CCCGGCGGCA CCACCGTCGT GCTCGTGCTC TCCGGCAGGC ACTCCCCCGG AACCACCCGC
CTCGCGGTCG GCGCCCACCA GGAGGTGGTG GTGCGCGAGC GCGCGGGGTG GGTGGAGGTC
GTGGTCAGGG GCGACGTGCC CGTCCGCGCC GGTCCCGCCG TGCGGCGCGC GATCCTCACC
GCGGCGCGCG GCGGCGCCGT TCCGGTGGTG GTGGACCTGC GCGAGCTGGG GGACCGGGCG
GACGGGTTGG TGCGCAGCCT GCGCGCGGTC GCCTCGGCCG CGGCCGAGGC GGGGACGCGC
GTGGTGGTGC GGGCGCCCGA GGGCGGGTCC GCGCACCGGG CGCTCGTCGC CTCCGGGGTC
GACCAGGTCG TCGACCTGGT CGGGCACGCT AGCCCCGGTC ACCGCCCAGC GCCTCGGCCA
CCGACGGGTG AACGCTGA
|
|---|
| Protein sequence | MTDQLADRHW RAEFPAEPAR LSALRQRVDR WLAGLGVEQD DRYDLLMAVN EAVSNSIEHA
YPPGSPGSVR VEATVEPDGR VRVVVADDGR WRVPPPGLSS RGRGLLLMRE SVDEVLLDRS
PGGTTVVLVL SGRHSPGTTR LAVGAHQEVV VRERAGWVEV VVRGDVPVRA GPAVRRAILT
AARGGAVPVV VDLRELGDRA DGLVRSLRAV ASAAAEAGTR VVVRAPEGGS AHRALVASGV
DQVVDLVGHA SPGHRPAPRP PTGER
|
|---|
| |