| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5339 |
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| Symbol | |
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| ID | 8329541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6349434 |
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| End bp | 6352061 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945777 |
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| Product | glycoside hydrolase family 9 |
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| Protein accession | YP_003103005 |
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| Protein GI | 256379345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCGC GCACACCCGC CCCCCGGCGT GCGACAGCCA TCTCGGCCGC ACTGGCCCTC
CTGGCGGCAG CGGCCACCGC GCCCCCCGCC ACCGCGCAAC CGGACCAGCG GGCGACCCCC
GATCGGGCGC AGTCACCCAG CGTGACGCAG GCCTACGAGC GGATCGTCAA CGGGTCGTTC
GCCTCCGGCA CCGCCGACCC CTGGTGGGCG GGCTCCGGCG TGACCAACCG GCTCGTCGAC
GGCGAGCTGT GCGCGCGGGT CCCCGGCGGC ACCGCCAACC CGTGGGACGC CCTGATCGGC
CAGAACGGCG TCCCGTTCGA GGCGGGCCAG CAGTACGTGC TCGCGTTCAC CGCCCGCGCC
GACCGCGCGC GCCCGGCCGC CGCCGCGCTC GGCGAGGGCG TCAGCCCGTA CCGCCAGATC
GCCAAGCACG ACGTGCAGCT CACCACCGAG CGCCAGAGCT TCACCTTCAC CTTCACCTCG
GACCTGGACT TCCCCGACGC GGGCGCGGGC CAGCTGACCT TCCACCTGGG CGCGCTGGCC
GAGGAGAGCA CGGTCTGCGT GGACGACGTC TCCCTCGTCG GCGGGGTGAA GCCGCCGGGC
GGCGAGCCCA CCGGCCCGTC GCGCAAGGTC CTCGTCGACC AGGTCGGCTA CCTGCCGAAG
GGCCCGAAGC GCGCCACCTC GCTGCACCCG TCGACCTCAC CGCAGCCGTG GACCCTGACC
AGGGGCGGCG CCACCGTCGC GCGGGGCACC ACCACCCCCA AGCCCGCCGA CGCGGCCTCG
GGCGACCCGG TGCACCTGAT CGACTTCTCC GCCGTGGAGA CCGAGGGCGA GGGCTACGTG
CTCACCGTCG GCGAGGAGTC GAGCTTCCCG TTCGACATCG GCGCCTCCCA CCTGGGGGAC
CTGCGCACCG ACGCGCTGAA GTTCTTCTAC CACCAGCGCA GCGGCACCCC GATCGAGGCC
GCCCACGTGG GTGAGACCTA CGCCCGCCCG GCCGGTCACG TCGACGTCGC CCCGAACAAG
GGCGACGGCG CCGTCGGCTG CCTGGTCGAC TGCGGTTACA CCCTGGACGT GCGGGGCGGC
TGGTACGACG CGGGCGACCA CGGCAAGTAC GTGGTCAACG GCGGCATCTC GGTCTGGCAG
GTGCTCAACT CCTACGAGCG CGCCAAGCTC AAGGGCACCG AGGCGGCGCT CGGCGACGGG
AAGCTGAACA TCCCGGAGAG CGGCAACGGC GTGCCGGACG TGCTGGACGA GGCCCGCTGG
GAGGTCGAGT TCCTGCTCCG GATGCAGGCG CCGGACGGCA TGGTCCACCA CAAGATCCAC
GACGTGAACT GGACCGGCCT CCCCCTGCTC CCGCACCAGG ACCCGCAGGC CCGCAGGCTG
TCCCCGACGA GCACCGCGGC GACCCTGAAC ACCGCGGCCG TGGCGGCGCA GGCCGCGCGG
CTGTGGCGCT CGGTCGACCC GGCGTTCGCC GACCGCGCCC TCGCGGCGGC CGAGCGGGCC
TACGCGGCGG CGAAGGCCAA CCCGGCCAAG CTCGCCGACC CGAACGACGC CACCGGCGGC
GGCGCGTACA ACGACAACGA CGTCAGCGAC GAGTTCTACT GGGCGGCGGC CGAGCTGCTC
ACCACCACCG GCAAGTCCGG CTACCGCGCC GACGTCACCT CGTCGCCGCA CTACAAGGCG
GCGGCGCTGA ACGGCCGGGG CATCGACTGG GCGTACACCG CGCCGCTGGG CGACGTGACG
CTCGCGCTGG TCCCGAACGG CCTGCCCGCC GCCGACGTCG CGGCGACCAG GGCCCGGTTC
GCGCAGGTCG CGGACGGGAT GCTGGCGCAG GCGGCGGCGC AGAACTACCC GGCCCCCTAC
GACACGGTGA ACTACGACTG GGGCTCGAAC GGCCTGGTCG CCAACAACGG CGGCGTGCTC
GGCATCGCGT TCGACCTGAC CGGTCAGGCG AAGTACCGGG ACGGCGCGTT CGAGGCGCTG
CACTACCTGC TGGGCCGCAA CCCGGTCGGG TACTCGTACG TCACCGGGTA CGGGGAGCAG
CCGGTGCGGA ACGTGCACCA CCGGCACTGG GCGAACCAGC TGGACCCGTC GCTGCCGATC
GCGCCCCCCG GCGTGCTGTC GGGCGGTCCG AACAGCGCGC TGCAGGACCC GATCGCGGCC
AGGCTGCTCC AGGGCTGCGC GCCGCAGAAG TGCTTCGTGG ACCACATCGA GGCGTACTCG
GTCAACGAGG TCACGGTGAA CTGGAACTCG GCGCTGGTGT GGCTGGCCAC GTGGGCGGCG
GAGGTCGCCG AGGCCCCGCA GCAGCCGGAG GGCGGCTGCT CGGTGTCGTA CCAGGCCAAC
TCGTGGCAGG GCGGCTTCAC CGCGAACCTG GTGGTGCGCA ACACCGGCGC CACCCCGTGG
ACGGCCTGGG AGCTGGGCTT CTCGTTCCCC GGCGACCAGC GGATCACCCA GTCCTGGTCG
GGCGTGTGGA GCCAGGAGGG CAACCGGGTG CGCGCGACCA ACGCGGCCTG GAACGGCGCG
GTGCGGCCGG GCGGGTCGGT GACCCTCGGG TTCAACGGCT CGCACGGCGG GACCAACCAG
CCGCCCGCGG CCTTCACGGT CAACGGGGCC CGGTGCTCGG CCGGGTAG
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| Protein sequence | MRPRTPAPRR ATAISAALAL LAAAATAPPA TAQPDQRATP DRAQSPSVTQ AYERIVNGSF
ASGTADPWWA GSGVTNRLVD GELCARVPGG TANPWDALIG QNGVPFEAGQ QYVLAFTARA
DRARPAAAAL GEGVSPYRQI AKHDVQLTTE RQSFTFTFTS DLDFPDAGAG QLTFHLGALA
EESTVCVDDV SLVGGVKPPG GEPTGPSRKV LVDQVGYLPK GPKRATSLHP STSPQPWTLT
RGGATVARGT TTPKPADAAS GDPVHLIDFS AVETEGEGYV LTVGEESSFP FDIGASHLGD
LRTDALKFFY HQRSGTPIEA AHVGETYARP AGHVDVAPNK GDGAVGCLVD CGYTLDVRGG
WYDAGDHGKY VVNGGISVWQ VLNSYERAKL KGTEAALGDG KLNIPESGNG VPDVLDEARW
EVEFLLRMQA PDGMVHHKIH DVNWTGLPLL PHQDPQARRL SPTSTAATLN TAAVAAQAAR
LWRSVDPAFA DRALAAAERA YAAAKANPAK LADPNDATGG GAYNDNDVSD EFYWAAAELL
TTTGKSGYRA DVTSSPHYKA AALNGRGIDW AYTAPLGDVT LALVPNGLPA ADVAATRARF
AQVADGMLAQ AAAQNYPAPY DTVNYDWGSN GLVANNGGVL GIAFDLTGQA KYRDGAFEAL
HYLLGRNPVG YSYVTGYGEQ PVRNVHHRHW ANQLDPSLPI APPGVLSGGP NSALQDPIAA
RLLQGCAPQK CFVDHIEAYS VNEVTVNWNS ALVWLATWAA EVAEAPQQPE GGCSVSYQAN
SWQGGFTANL VVRNTGATPW TAWELGFSFP GDQRITQSWS GVWSQEGNRV RATNAAWNGA
VRPGGSVTLG FNGSHGGTNQ PPAAFTVNGA RCSAG
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