| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5328 |
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| Symbol | |
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| ID | 8329530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6339241 |
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| End bp | 6340680 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945766 |
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| Product | putative transcriptional regulator, PucR family |
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| Protein accession | YP_003102994 |
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| Protein GI | 256379334 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATGC CAATGAGCGG CCGGGGTTCC CGGTCCCGCG GGTCCGCGCC GTGGTCGTCG
GTGCCGCCGG ACCTGGCGCG CAGGCTCCAA CCGATCGCGG GCGTGCTGGT GCGCGACGCC
GTGCAGGAGA TCCGGCGCTC CGTCCCCGCC TACGCCCAGC CCCTGGAGGG CAAGTTCCGC
GAGGTCCTGG TCGGCTCGGT GGAGACCGCG ATCTTCCAGT GCTTCGAGTC GATCGTCGAC
CCGGACGCGC CGACCGGCGA CTGGCAGGCG GTGCTGCGCT ACAGCGGCCG GGTCGAGTTC
CTCGAAGGCC GCACGATGGA CGCGCTGCAG AACGCGGTGC GGGTCGGGGC GCGCGTGGTG
TGGCGGCACC TGAGCGAGCA CGGGCGCGAG CTGGGGCTGC CCAGCGACGC CCTGTTCGCC
GTGGCCGACG CGATCTTCGC CTGGGTGGAC GAGCTGTGCC GGGTCGCCGT CGAGGGCTAC
ACGGAGGCGC AGGCCGGGGC GAGCGGCGCG CTGGAGCGCA GGCGCAGGCA GCTGCTCAAG
GTGCTGCTGG GCGAGTCGCC CGCGTCGGCC CGGTCGCTGG CGGACCTGGC GGCGTCCACG
GACTGGCGGC TGCCGGAGCG GGTCGCGGTG GTGGCGCTGG AGTACCGGGA GGACCAGCAC
CAGCTGCCGT CGCCCGCGTT CGGCCGGGAC GTGCTGCTGG ACCTGGAGAG CTCGGAGCCG
TGCCTGGTGC TGGGCGGACC GGCCGACCGG CGCGGGCTGG AGGCGGAGCT GCGCGGGCGC
CGGGCGGCGG TGGGGCCGGT GGTGCCGCTG GCCGACGCGC GCCGGTCGCT GGGCTGCGCG
CGGCGGGCGC TCGGGCTGGT GCGGCGGGGG CTGCTGCCGC AGGCGCGGGT CACCTGGTGC
GAGGAGCACC TGGCGGTGCT GGCGCTGCTC GCCGACGAGT TCCTGGTGGA GGCGCTGGTC
GGGCGGGCGC TGGAGGTGTT CGCGCACCTG ACCGCCAAGC AGCGGCACCG GTTGGAGACG
ACGCTGCTGG CGTGGCTGGG CACCAGGGGC GGGGTGGTGG AGGTGGCGGC CAGGCTGGGC
GTGCACCCGC AGACCGTCCG CTACCGGATG CACCAGGTGG AGCGGCTGCT CGGCGACCGG
TTGGACGACC CGGACGAGCG GTTGGCGCTG GAGATGGCGC TGCGGGCGCG GTTGCTGCTG
CACGACGCGA AACCGGTCGA GCGGGCGCGC GCCGGGGTGA CCGCCCTGCC GTCCCGCGCG
AACCCACCGG CGGCGGATCC CGGGGTGCGG AAGCCTCCGG CGGCGAACCC CAAGGCGGTG
AACTCCCCGG CGGCGAACCC CAGGACGGCG AATCCCCAAC CGGCGCAGGC GATCCGGCCC
GCGCGCGGCC CCGCGCCACG TCCGCGCCAC CCGGCGCGCT CCCCCGCCGA CCCCCGCTGA
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| Protein sequence | MAMPMSGRGS RSRGSAPWSS VPPDLARRLQ PIAGVLVRDA VQEIRRSVPA YAQPLEGKFR
EVLVGSVETA IFQCFESIVD PDAPTGDWQA VLRYSGRVEF LEGRTMDALQ NAVRVGARVV
WRHLSEHGRE LGLPSDALFA VADAIFAWVD ELCRVAVEGY TEAQAGASGA LERRRRQLLK
VLLGESPASA RSLADLAAST DWRLPERVAV VALEYREDQH QLPSPAFGRD VLLDLESSEP
CLVLGGPADR RGLEAELRGR RAAVGPVVPL ADARRSLGCA RRALGLVRRG LLPQARVTWC
EEHLAVLALL ADEFLVEALV GRALEVFAHL TAKQRHRLET TLLAWLGTRG GVVEVAARLG
VHPQTVRYRM HQVERLLGDR LDDPDERLAL EMALRARLLL HDAKPVERAR AGVTALPSRA
NPPAADPGVR KPPAANPKAV NSPAANPRTA NPQPAQAIRP ARGPAPRPRH PARSPADPR
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