| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5323 |
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| Symbol | |
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| ID | 8329525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6329566 |
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| End bp | 6332643 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644945761 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003102989 |
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| Protein GI | 256379329 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCC GGCTGCTGGG GCCGGTCGCG GTCGGGACGG ACGCCGTCCA GGCCGCGCTC
GGCGGACCCA AGCCGAAGGC CCTGCTGGTG GCGCTCGCGC GCCAGGGCGG GCACGTCGTC
GGCATCGACC GCCTGGTCGA CCTGCTGTGG GGCGAGACAC CACCCGCGTC CGGCACGGCG
CTCGTGCACA CCTACGTCTC CCAGCTGCGC CGCGCGCTCG CCAAGGTCGG CCTGCCCGAC
GCCCTGCGCA CCAGCTCGCC CGGCTACCGC CTCGTCGCCG AGCCCGGCGA CTGCGACGTG
GACGTGTTCA CCGCCGAGCA CACCGCCGCC CGCGAGGCCG AGCGCTCCGG CGACCACGCC
GCCGCGCACG CCGCGTACGG CCGCGCGCTG GCCCTGTGGC GCGGCCCGGC GCTCGACGGC
GTCGACGCGG ACTTCGCGCT GGCGTGGGCG CAGGAGCTGG CCGAGCACCG GCTGGCCGCG
CGCGACGGCC TCGCGCGGAC GGCGCTGGCG CTGGGCCGCC CGCTGAGCGC GGCCGACGAG
CTGCGCGGCC TGGTCGCCGA GCACCCGCTG CGCGAGGAGA GCCGGGCGCT GCTGATGCGC
GCGCTGGCCG AGTCGGGCAG GCAGGCCGAC GCGCTGGAGG TCTACCGGGA CGGCAGGCGG
CACCTGCTGG ACGAGCTGGG CATCGAACCC GGCCGGGGCC TGCGCGAGCT GCACACCGCG
ATCCTGGACG GCTCCCTGAC CACCCCGGCC GCCGACGTGC CGCGCCCCGC CGCAGCCGCA
GCCGCAGTCA CGGCCACCGC GACCGCCGCC CCGGCCCGCC CGCTCACCCG CACCCTGCCG
CCCGACATCA ACGACTTCAC CGGCCGCGCC GACGAGCTGG CCGCGATCCT CGCCCTCGGC
GCCACCGGCC CCGACCGCCC CGCCGCGCCC GTCGTGGTGG TGTCCGGCGC GGGCGGCACC
GGCAAGTCCG CGCTGGCCGT GCACGCCGCG CACCTGCTGG CCGAGCAGTA CCCGGACGGC
CAGCTGTTCA CCGACCTGCG CGGCCACGGC GCCCCACCCA GCGCCTCCAC CGTGCTGGCC
CGCTTCCTCG GCGCGCTCGG CGTGCCCGTG GAGGACCTGC CACCCGGCCT GGACGACCGC
ATCGCCCTCT ACCGGCGGCA CCTGACCGGC CGCCGCCTGG TGATCGTGCT CGACAACGCC
CGCACCGAGC AGCAGGTGCG CCCGCTGCTG CCCACCGAAC CCGGCTGCCT GGTCCTGGTC
ACCAGCCGCG CCCGCCTCGC GGGCCTGGGC TCCGCCGTGG ACCTGGAGGT GTTCGACGCC
GGGTCGGCGG TGGAGATGCT GGGCCGGATC ATCGGCTCGG ACCGGGTCGC CTCCGCGCCC
GACGCCGCCC GCCGCATCGC GACCCTGTGC GCCGGGGTGC CGCTGGCGAT CCGGGCGGCG
GGCGCGAAGC TGCTGGCCCG CCCGCACTGG CCGCTCAAGT CGCTGGCGAC CCGGCTGTCC
GACGAGCGGC GGCGGTTGGA CGAGCTGACC GTGGGCGACC TGGCGATCCG CTCGTGCCTG
GGCCTGAACT ACGCCGAGCT GGACGAGCGC GCCAAGCACG CGTTCCACCT GCTGTGCCTG
CTGGACCTGC CGGACTTCGG CTGGTGGGTG GCCGCCCCGC TGCTGGGCGT GGACACCGCG
ACCGCCGAGG ACCTGGTGGA GAACCTGGTC GACCTGCGGC TGCTGGACGT GGCGGGCATC
GACCCGATCG GCCGGGTCCG CTACCGCTTC CACGACCTGG TGCAGCTCTT CGGCGCGGAG
CTCGCCGCCC AGCACGAGCC GCCCGGCGCC GCCACCGACG CGGTCGCCGC GTGCCTGGCG
GCGTGGGCCG ACCTGGCCGA GACCGGTGTG AAGGGCCTGC CGCGCGTCAC GCTCAGCCCC
CGCCTGCCCG CCGCCCCGGC CGGGGCCCCG AGCACCGATC CCGAGCTGGT CGCCGAGGTC
GAGGCCGACC CGGCGGGCTG GCTGGACGCC GAGACCGCCG CCGCCGTGCG CGCCGTCCAC
CGCGCCCACG AGCTGCGCGT CGACGCGGTG ACCACGCTGC GCGTCGCGGT GCTGCTGTCC
TCGGCGTTCG CCGCCCGCAA CGAGTTCGAG GCCTGGCAGC GCACCCTGCG GGTCGCGCTG
GCGCTGGCCG AGGAGAGCGG CGACCCGCGC GCCGGGGCCG TGGTCCTGGC CGGGCTGGGG
CAGCTGCACG CCGAGCTGGA CGAGTACGAC GAGGCCCTCG CGCACTTCGA GCGGGCCCTG
GAGCGCGCCG ACGCGGCCGG GGACGACGCG GTGCGCGCGG TGTGCCTGGC GGGCACCGGC
ACCGCGCACC GCGAGCGCGG CAACCCCGAG CTGGCCGCCA CCGCCCTGAC CGCCGCCGCC
GAGCTGGGCG CCGCGCTGGC CGACGACGCC GTCGTGGCCG CCGCCGAGTA CGGCCTGGGG
GCCCTGCGCC GCGACCTGGG CGACCTGGCG GGCGCGGCGG ACCGGTTCGA CCGGGCCGTG
CGCCGCTACG CCGCGGCGGG CGACCGGCGC GGCGAGGCGC TGGCCCTGCG CGGGGTGGCG
CTGTGCCACC GGGCGCGGGG TGAGCACCGG GTGTCCGCCG AGCTGTGCGA ACGGGCGGCG
GTGGCGCTCG ACGAGGTCGG TGACGCCCTC GGCGCGGCCT ACGCCCGCCA GGCGTGGGCC
AAGGCCGCCC TGCGCCTGCC CGGTTCCCCG ACCGCCGAGC TGGCGGCCTG CCTGGACGCG
TGCCTCGCGG TGTGCGAGCG CGGCAACGAC CGGTTCGGCG TCGCGCTGGT CACCCGCACC
ACCGGCGAGC TGCACCTGTC CCGAGGCGAC CTGGCCACGG CCCGCGAGCA CCTCCGCGCG
GCGCTGGCGG GCTGGACCGA GCTCGGCCTG GACACCTGGC GCGCCCGCAC CCTGCGCGAC
CTGGCCGCCG CGGACCCCGA GCACCAGGAC GAGCACTGGG CGCTGGCCCG CGAACTGCTC
AGCGGCACCG GGGCCCGCGA GGAGCGCGAA CTCGCCGAGA CCACCCCCGT GGGCTGGCGC
GCCGCCGTCG TCCGCTGA
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| Protein sequence | MRIRLLGPVA VGTDAVQAAL GGPKPKALLV ALARQGGHVV GIDRLVDLLW GETPPASGTA
LVHTYVSQLR RALAKVGLPD ALRTSSPGYR LVAEPGDCDV DVFTAEHTAA REAERSGDHA
AAHAAYGRAL ALWRGPALDG VDADFALAWA QELAEHRLAA RDGLARTALA LGRPLSAADE
LRGLVAEHPL REESRALLMR ALAESGRQAD ALEVYRDGRR HLLDELGIEP GRGLRELHTA
ILDGSLTTPA ADVPRPAAAA AAVTATATAA PARPLTRTLP PDINDFTGRA DELAAILALG
ATGPDRPAAP VVVVSGAGGT GKSALAVHAA HLLAEQYPDG QLFTDLRGHG APPSASTVLA
RFLGALGVPV EDLPPGLDDR IALYRRHLTG RRLVIVLDNA RTEQQVRPLL PTEPGCLVLV
TSRARLAGLG SAVDLEVFDA GSAVEMLGRI IGSDRVASAP DAARRIATLC AGVPLAIRAA
GAKLLARPHW PLKSLATRLS DERRRLDELT VGDLAIRSCL GLNYAELDER AKHAFHLLCL
LDLPDFGWWV AAPLLGVDTA TAEDLVENLV DLRLLDVAGI DPIGRVRYRF HDLVQLFGAE
LAAQHEPPGA ATDAVAACLA AWADLAETGV KGLPRVTLSP RLPAAPAGAP STDPELVAEV
EADPAGWLDA ETAAAVRAVH RAHELRVDAV TTLRVAVLLS SAFAARNEFE AWQRTLRVAL
ALAEESGDPR AGAVVLAGLG QLHAELDEYD EALAHFERAL ERADAAGDDA VRAVCLAGTG
TAHRERGNPE LAATALTAAA ELGAALADDA VVAAAEYGLG ALRRDLGDLA GAADRFDRAV
RRYAAAGDRR GEALALRGVA LCHRARGEHR VSAELCERAA VALDEVGDAL GAAYARQAWA
KAALRLPGSP TAELAACLDA CLAVCERGND RFGVALVTRT TGELHLSRGD LATAREHLRA
ALAGWTELGL DTWRARTLRD LAAADPEHQD EHWALARELL SGTGAREERE LAETTPVGWR
AAVVR
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