Gene Amir_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5321 
Symbol 
ID8329523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6327469 
End bp6328749 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID644945759 
Productglycoside hydrolase family 16 
Protein accessionYP_003102987 
Protein GI256379327 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.349726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGC GAGTAGCGGT GGGCGCGCTG GCGCTCGCCC TGGGTCTGGC GGCTGCGCCG 
TTGACCGCCA TCGGGGCGCA GCAGCCCGCG CAGTACCAGA AGGCCGCCGC CCAGGCGGGC
AAGGTCATCT GGGAGGACAA CTTCGACGGC TCCGCCGGGC AGCGGGTCAA CTCCTCGAAG
TGGAACACCG AGACCGGTGA CAACTTCGGC AACAACCGCG AGCACCAGTA CTACACCGAT
TCAGCGGGCA ACGCGGCGCT GGACGGGTCG GGCAACCTGG TGATCACGGC CAAGAAGGAG
AACCCCGCCA ACTACAACTG CTGGTACGGC CGCTGCCAGT ACACCTCGGC GCGGATCAAC
ACCTCCGGCA AGTTCACGAC CACGTACGGC AAGGTCGAGG CGCGGATGAA GCTGCCGCGC
GGCAAGGGCA TCTGGCCCGC GTTCTGGATG CTGGGCCAGG ACATCGGCTC GAACCCGTGG
CCGAACAGCG GCGAGATCGA CATCATGGAG TTCCTGGGCC ACGAGCAGAA CAAGGTCTAC
GGCACCATCC ACGGCCCCGG CTACTCGGGC GCGGGCGGCG TCGGCGGCTC CTACACCGGC
CCGAACTTCG CGGACGGCTT CCACACCTTC GCGGTGGAGT GGGCGCCGAA CTCGATCAAG
TGGCTGGTCG ACGGCAACGT CTTCTTCCAG ACCACCCCGG CGTCGGTGAA CGGCAACCGG
TGGGTGTTCG ACAAGCCGTT CTTCGTGATC CTGAACCTCG CGGTCGGCGG CGAGTGGCCG
GGCTACCCGG ACGCCAGCAC CCAGTTCCCG CAGCAGATGC TCGTGGACTA CGTGCGGGTC
ACCGACACCA GCGGTGACAA CGGCGGCGGT GGCGGTGGCG GCAACCCCGG CGTGGTCAAG
AGCGGCCGGG TCACCGGGCT CGGCGGCAAG TGCCTCGACG TGCCGTGGGC CAACAGCGCC
AGCGGCACCC CGATCCAGGT CGTCTCCTGC AACGGCAACG CCGCGCAGAA CTGGACCTTC
TACACCGACG GCTCGATCCG CGCGCTGGGC AAGTGCCTGG ACGTGTCGAA CAGCGGCAAG
GCCGACGGCA CCGTCATCCA GCTCTGGGAC TGCAACGGCA CCGGGGCGCA GAAGTGGGCG
GTCAGCGGCG CGAACGACGT CGTGAACATC AACGCCGACA AGTGCCTGGA CATCAAGGGC
AACACCAGCG CCGACGGCAC GCGCGTCCAG CTGTGGACCT GCACCGGCGC GGCGAACCAG
AAGTGGAACG CCTTCGTCTG A
 
Protein sequence
MRKRVAVGAL ALALGLAAAP LTAIGAQQPA QYQKAAAQAG KVIWEDNFDG SAGQRVNSSK 
WNTETGDNFG NNREHQYYTD SAGNAALDGS GNLVITAKKE NPANYNCWYG RCQYTSARIN
TSGKFTTTYG KVEARMKLPR GKGIWPAFWM LGQDIGSNPW PNSGEIDIME FLGHEQNKVY
GTIHGPGYSG AGGVGGSYTG PNFADGFHTF AVEWAPNSIK WLVDGNVFFQ TTPASVNGNR
WVFDKPFFVI LNLAVGGEWP GYPDASTQFP QQMLVDYVRV TDTSGDNGGG GGGGNPGVVK
SGRVTGLGGK CLDVPWANSA SGTPIQVVSC NGNAAQNWTF YTDGSIRALG KCLDVSNSGK
ADGTVIQLWD CNGTGAQKWA VSGANDVVNI NADKCLDIKG NTSADGTRVQ LWTCTGAANQ
KWNAFV