| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5321 |
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| Symbol | |
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| ID | 8329523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6327469 |
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| End bp | 6328749 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644945759 |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_003102987 |
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| Protein GI | 256379327 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.349726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAAGC GAGTAGCGGT GGGCGCGCTG GCGCTCGCCC TGGGTCTGGC GGCTGCGCCG
TTGACCGCCA TCGGGGCGCA GCAGCCCGCG CAGTACCAGA AGGCCGCCGC CCAGGCGGGC
AAGGTCATCT GGGAGGACAA CTTCGACGGC TCCGCCGGGC AGCGGGTCAA CTCCTCGAAG
TGGAACACCG AGACCGGTGA CAACTTCGGC AACAACCGCG AGCACCAGTA CTACACCGAT
TCAGCGGGCA ACGCGGCGCT GGACGGGTCG GGCAACCTGG TGATCACGGC CAAGAAGGAG
AACCCCGCCA ACTACAACTG CTGGTACGGC CGCTGCCAGT ACACCTCGGC GCGGATCAAC
ACCTCCGGCA AGTTCACGAC CACGTACGGC AAGGTCGAGG CGCGGATGAA GCTGCCGCGC
GGCAAGGGCA TCTGGCCCGC GTTCTGGATG CTGGGCCAGG ACATCGGCTC GAACCCGTGG
CCGAACAGCG GCGAGATCGA CATCATGGAG TTCCTGGGCC ACGAGCAGAA CAAGGTCTAC
GGCACCATCC ACGGCCCCGG CTACTCGGGC GCGGGCGGCG TCGGCGGCTC CTACACCGGC
CCGAACTTCG CGGACGGCTT CCACACCTTC GCGGTGGAGT GGGCGCCGAA CTCGATCAAG
TGGCTGGTCG ACGGCAACGT CTTCTTCCAG ACCACCCCGG CGTCGGTGAA CGGCAACCGG
TGGGTGTTCG ACAAGCCGTT CTTCGTGATC CTGAACCTCG CGGTCGGCGG CGAGTGGCCG
GGCTACCCGG ACGCCAGCAC CCAGTTCCCG CAGCAGATGC TCGTGGACTA CGTGCGGGTC
ACCGACACCA GCGGTGACAA CGGCGGCGGT GGCGGTGGCG GCAACCCCGG CGTGGTCAAG
AGCGGCCGGG TCACCGGGCT CGGCGGCAAG TGCCTCGACG TGCCGTGGGC CAACAGCGCC
AGCGGCACCC CGATCCAGGT CGTCTCCTGC AACGGCAACG CCGCGCAGAA CTGGACCTTC
TACACCGACG GCTCGATCCG CGCGCTGGGC AAGTGCCTGG ACGTGTCGAA CAGCGGCAAG
GCCGACGGCA CCGTCATCCA GCTCTGGGAC TGCAACGGCA CCGGGGCGCA GAAGTGGGCG
GTCAGCGGCG CGAACGACGT CGTGAACATC AACGCCGACA AGTGCCTGGA CATCAAGGGC
AACACCAGCG CCGACGGCAC GCGCGTCCAG CTGTGGACCT GCACCGGCGC GGCGAACCAG
AAGTGGAACG CCTTCGTCTG A
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| Protein sequence | MRKRVAVGAL ALALGLAAAP LTAIGAQQPA QYQKAAAQAG KVIWEDNFDG SAGQRVNSSK
WNTETGDNFG NNREHQYYTD SAGNAALDGS GNLVITAKKE NPANYNCWYG RCQYTSARIN
TSGKFTTTYG KVEARMKLPR GKGIWPAFWM LGQDIGSNPW PNSGEIDIME FLGHEQNKVY
GTIHGPGYSG AGGVGGSYTG PNFADGFHTF AVEWAPNSIK WLVDGNVFFQ TTPASVNGNR
WVFDKPFFVI LNLAVGGEWP GYPDASTQFP QQMLVDYVRV TDTSGDNGGG GGGGNPGVVK
SGRVTGLGGK CLDVPWANSA SGTPIQVVSC NGNAAQNWTF YTDGSIRALG KCLDVSNSGK
ADGTVIQLWD CNGTGAQKWA VSGANDVVNI NADKCLDIKG NTSADGTRVQ LWTCTGAANQ
KWNAFV
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