Gene Amir_5320 details

Gene Information

• Locus tag: Amir_5320
• ID: 8329522
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6325289
• End bp: 6327316
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644945758
• Product: bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase
• Protein accession: YP_003102986
• Protein GI: 256379326
• COG category: [C] Energy production and conversion
• COG ID: [COG1012] NAD-dependent aldehyde dehydrogenases
• TIGRFAM ID: [TIGR02278] phenylacetic acid degradation protein paaN

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.248137
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTCC TGCGCAGCTA CGTCTCCGGT CGATGGCACA CCCCCACCAC CGAGGGGGCG 
CCACTGCACG ACGCGGTCAC CGGCGAGGAG ATCGCCCGCA TCAGCTCCGA CGGCGTGGAC 
ATGGGGGCCG CGCTGCGCCA CGGGCGCGAG GTCGGCGGAC CGGCGCTGCG GGAGCTGACC 
TTCCACCAGC GCGGGGCGCT GCTCAAGGCG CTGGCCTCGC ACCTGCGCGA GCACCGCGAC 
GAGCTCTACG AGCTGTCCGC CCGCACCGGC GCGACCCGCA CCGACTCGAT GGTCGACGTG 
GACGGCGGCA TCGGCGTCCT GTTCACCTAC TCCAGCAAGG CCCGCCGCGA GCTGCCGAAC 
GACCGGGTGC TGGTCGACGG CGCGGTGGAG CCGCTGGGCA GGGGCGGCAC GTTCGCGGGC 
GTGCACATCG CCACCCCGCT GCGGGGCGTG GCCGTGCAGA TCAACGCGTT CAACTTCCCG 
GTGTGGGGGC CGCTGGAGAA GTTCGCGCCC GCGTTCGTCG CGGGCGTGCC CACGCTGATC 
AAGCCCGCCT CGCCCACCGC CTACCTCACC GAGCGCCTCG TCGAGCTGGT GCTGGGCTCC 
GGGCTGCTCC CGGAGGGCTC GCTGCAACTG GTGTGCGGCA GCGCCGGGGA CCTGCTGGAC 
CACCTCACCG AGCAGGACCT GGTGGGCTTC ACCGGGTCCG CCGCCACCGC CGCGAGGCTG 
CGCACCCACC CCGCCGTGGT GCGCTCCTCG GTCCGGTTCA CCGCCGAGGC GGACTCGCTC 
AACTGCTCCG TCCTCGGCCC CGACGCCGAG CCCGGCACCC CCGAGTTCGA CCTGTTCGTC 
AAGCAGCTCG TGTCCGAGAT GACGGTCAAG GCAGGCCAGA AGTGCACCGC GATCCGGCGC 
GCGCTGGTCC CCGAGCCGCT GCTCGACGCC GTCGCCGAGG CCGCGTCCGC CAGGCTGGGG 
CGCGTGGTGG TCGGCAACCC GGCCAGCAGC GGCGTCCGGA TGGGCGCGCT GGCGAACCTG 
GAGCAGCGCG AGGAGGTCCG CAGGGCGCTC AAGTCGCTGG TGTCGGCCGG GCGGATCGTG 
CACGGCTCCC CGGACCGGGT GGACGTGGTC GACGCCGACC CGGAGCGCGG CGCGTTCCTG 
TCCCCGGTGC TGCTGACCGC CGACCCCGAC CGGGCGCAGC CGCACGAGGT GGAGGCGTTC 
GGGCCGGTGT CCACGCTGCT GCCGTACCGG GACGCCGCGC ACGCGGTGGA GCTGGCGGCA 
CGCGGCGCGG GCAGCCTGGT CGGGTCGGTC GTCTCGCACG ATGCGGACTT CGTGCGCGAG 
GTCGTGCTCG GCGTCGCCCC CTGGCACGGC AGGCTCCTCG TGCTCGACCG GGACGACGCG 
GGCGAGTCCA CCGGCCACGG CTCGCCGCTG CCGACCCTCG TGCACGGCGG CCCCGGCCGG 
GCGGGCGGCG GCGAGGAGCT GGGTGGGGTG CGCGGCGTGC TGCACCACCT GCAGCGCACC 
GCGGTGCAGG GCAGCCCGGA CGTGCTGACC GCCGTCACCG GCCGCTGGAC CACCGGGGCC 
AAGCGCACGG CGGGCGACGA GCACCCGTTC CGGAAGTCGT TGGCGCGCTT GGCGATCGGT 
GACTCGATCA CCGCCGGTCC GCGCGCCGTG AGCCAGGCCG ACGTGGAGCA CTTCGCCGAG 
TTCACCGGCG ACACGTTCTA CGCGCACACC GACGACGCGG CGGCCGCCGC GAACCCGTTC 
TTCGGCGCGC GGGTGGCCCA CGGCTACCTG GTGGTCTCGC TCGCGGCCGG GCTCTTCGTG 
TCCCCGGAGC CCGGCCCGGT GCTGGCCAAC TACGGGCTGG AGAACCTGCG GTTCCTGACC 
CCGGTGTTCT TCGGCGACGA GCTGACCGTG ACGTTGACGG CCAAGCAGAT CACCCCGCGC 
GAGGACCAGG AGTACGGCGA GGTCCGGTGG GACGCGGACG TGGTGAACCA GAAGGGCGAG 
TCGGTGGCGA AGTACGACGT GCTCACGCTG GTGGCCAAGG AGGGCTGA 

 

Protein sequence

MPVLRSYVSG RWHTPTTEGA PLHDAVTGEE IARISSDGVD MGAALRHGRE VGGPALRELT 
FHQRGALLKA LASHLREHRD ELYELSARTG ATRTDSMVDV DGGIGVLFTY SSKARRELPN 
DRVLVDGAVE PLGRGGTFAG VHIATPLRGV AVQINAFNFP VWGPLEKFAP AFVAGVPTLI 
KPASPTAYLT ERLVELVLGS GLLPEGSLQL VCGSAGDLLD HLTEQDLVGF TGSAATAARL 
RTHPAVVRSS VRFTAEADSL NCSVLGPDAE PGTPEFDLFV KQLVSEMTVK AGQKCTAIRR 
ALVPEPLLDA VAEAASARLG RVVVGNPASS GVRMGALANL EQREEVRRAL KSLVSAGRIV 
HGSPDRVDVV DADPERGAFL SPVLLTADPD RAQPHEVEAF GPVSTLLPYR DAAHAVELAA 
RGAGSLVGSV VSHDADFVRE VVLGVAPWHG RLLVLDRDDA GESTGHGSPL PTLVHGGPGR 
AGGGEELGGV RGVLHHLQRT AVQGSPDVLT AVTGRWTTGA KRTAGDEHPF RKSLARLAIG 
DSITAGPRAV SQADVEHFAE FTGDTFYAHT DDAAAAANPF FGARVAHGYL VVSLAAGLFV 
SPEPGPVLAN YGLENLRFLT PVFFGDELTV TLTAKQITPR EDQEYGEVRW DADVVNQKGE 
SVAKYDVLTL VAKEG