Gene Amir_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5306 
Symbol 
ID8329508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6308101 
End bp6309090 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content71% 
IMG OID644945745 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003102973 
Protein GI256379313 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCAG CCGTGATCAC CGGGGTCGGC TCGGTGGAGG TCACCGAGGT CCCCGACCCC 
ACACCGGGCC CCCGCGAGGT CGTGGTGGAC GTCGCCGCGT GCGGGCTGTG CGGCACCGAC 
CTGCACATCC TGCAGGGCGA GTTCGCGCCG ACCCTGCCGG TCGTGCCGGG CCACGAGTTC 
TCCGGCGTCA TCGCCGAGGT CGGCTCCGAC GTCACCGAGC TCAAGGTCGG CGACCGGGTG 
GCGGTCGACC CGTCGCTGTA CTGCTTCGAG TGCCGCATGT GCCGCCTGGG CAAGAACAAC 
CTGTGCGAGC GCTGGAACGC CATCGGCGTC ACCCGCTCCG GCGGCGCCGC CGAGTTCGCG 
GTCGCCCCGG TCTCGAACTG CGTGAAGCTG CCCGACTCCG TCCGCACCGA GGACGCCGCG 
CTCATCGAGC CGCTGTCCTG CGCGGTGCGC GGCTACGACG TGCTGCGCTC CCAGATGGCC 
AGCCGGGTCC TCATCTACGG CTCCGGCACC ATGGGCCTGA TGATGCTCCA GCTGGGCAAG 
CTCACCGGCG CCTCCAGCAT CGAGGTCGTC GACCTCAACC CGGAGCGCCT GGCCACCGCC 
CACAAGCTCG GCGTCACCGC CACCGCGGCG TCCGCCGACG AGCTGGACCG CCCGCAGGGC 
TGGGACGTCG TCATCGACGC CACCGGCAAC GCCAAGGCCA TCCAGGACGG CCTCGGCCGG 
GTCGCCAAGG GCGGCACGTT CCTGCAGTTC GGCGTCTCCG ACTACGCGAC GCGGGTGACC 
ATCGACCCGT ACCGCATCTA CAACCAGGAG ATCACCATCA CCGGCTCGAT GGCGGTGCTG 
CACTCGTTCG AGCGCGCGGC CGACCTGTTC GCCACCGGTG TGCTCGACCC CGAGGTCTTC 
ATCAGCCACC GCGAGCCGCT GTCGAGCTAC GCGTCGGCGC TGGAGATGTT CAAGAACGGC 
CAGGGCCGCA AGATCCAGGT CCTGCCGTAG
 
Protein sequence
MKAAVITGVG SVEVTEVPDP TPGPREVVVD VAACGLCGTD LHILQGEFAP TLPVVPGHEF 
SGVIAEVGSD VTELKVGDRV AVDPSLYCFE CRMCRLGKNN LCERWNAIGV TRSGGAAEFA 
VAPVSNCVKL PDSVRTEDAA LIEPLSCAVR GYDVLRSQMA SRVLIYGSGT MGLMMLQLGK 
LTGASSIEVV DLNPERLATA HKLGVTATAA SADELDRPQG WDVVIDATGN AKAIQDGLGR 
VAKGGTFLQF GVSDYATRVT IDPYRIYNQE ITITGSMAVL HSFERAADLF ATGVLDPEVF 
ISHREPLSSY ASALEMFKNG QGRKIQVLP