| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5298 |
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| Symbol | |
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| ID | 8329500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6297234 |
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| End bp | 6298163 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945737 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003102965 |
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| Protein GI | 256379305 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00273458 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCCCG TCGACGACAT CCTGACCACG ATGGGGCTGG CCCATCGGTC CCACCACCGG
GTGACGGCGT CCGCGCCGTG GGGGGTGGCG TTCTCCGGGG CCGCGCCGAT GCGGCTGGTC
GTGGTGGCGC GGGGGCGGTG CGTGCTCAGC GAGGGCGGGG GCGTCGTGGA GCTCGGCGCC
GGGGACTGCC TGGTGGTGCG CGGGGGTGCG GAGTTCGTGT TGTCCGACGT GGCCGAGCGG
GTTCCGGCGC CCGCGCGGGA GGTGCTGACC GCGCGGGAGG TCGCGGTCGG GGGTGGGGGC
GCGGGGTGCG AGGTGCTGGT GGCGGCGTTC TCGTTCGACG CGGTGGCCGC CGAGCCGCTG
CTGCCCCGGT TGCCGGACGT GCTGCGGGTG TCGTTGCGGG GCGGGAACCT GCGGCGGGTG
CTGGCGACGG TGGAGCTGAT GGTGCTGGAG TCGGGGGACG GGTTCGGCTC GGAGCTGGTG
CTGGGGAAGT TGGGGGACGT GCTGCTGGTG CAGGTGATGC GGGCCTGGTG CGCGGGGTCG
GGGGACGACC GGCCGGGGTG GTTGGCGGCG CTGCACGATC CTCGGCTTTC CCTTGCCACG
CGGGCGATGC ACGGGGATCT GGCGCACCCG TGGACGGTGG CGTCGCTGGC CGGGCGGGCG
GGGATGTCGC GGTCGGCGTT CGCGGCGGCT TTTCGGGAGC GGACCGGGGA GTCGCCGTTG
GCGCACTTGA CGTACTGGCG GATGCACCGG GCGAAGGCGC TGCTGCGGGA GGGGCGGACG
TTGCAGGAGA TCGCGGTTCG GGTGGGGTAC GAGACGGACA CCGCGTTGAG CCGGGCTTTT
CGGCGGGCGG AGGGGGTTTC GCCTGGACGG TGGCGGGGGT TGGTGGCGAG GGTTGGGGAT
TCGGGCGGGG AGGCTTGTCC GGTGGCTTGA
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| Protein sequence | MDPVDDILTT MGLAHRSHHR VTASAPWGVA FSGAAPMRLV VVARGRCVLS EGGGVVELGA
GDCLVVRGGA EFVLSDVAER VPAPAREVLT AREVAVGGGG AGCEVLVAAF SFDAVAAEPL
LPRLPDVLRV SLRGGNLRRV LATVELMVLE SGDGFGSELV LGKLGDVLLV QVMRAWCAGS
GDDRPGWLAA LHDPRLSLAT RAMHGDLAHP WTVASLAGRA GMSRSAFAAA FRERTGESPL
AHLTYWRMHR AKALLREGRT LQEIAVRVGY ETDTALSRAF RRAEGVSPGR WRGLVARVGD
SGGEACPVA
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