| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5294 |
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| Symbol | |
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| ID | 8329496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6293171 |
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| End bp | 6293743 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945733 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_003102961 |
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| Protein GI | 256379301 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGAACGGG TTGTGCTGCT GGACGAGACC GGTGCGGCCG TGGGCGAGGC CGACAAGGCG
ACTGTGCACC ACGAGGAGAC GCCGCTTCAC CTGGCGTTCT CCAGCTACCT CTTCGACCGG
GGCGGCAGAC TCCTGCTGTC CCGGCGAGCG CTGCACAAGA AGACCTGGCC GGGCGTGTGG
ACCAACTCGT GCTGCGGTCA CCCCGCGCCG GGCGAGGACC TGGAGGCCGG GGTGCGGCGG
CGGCTCGCCG AGGAGCTGGG GCTCCCGGAC GTCGGGCTGG ACCTGGTCCT GCCCGGCTTC
CGGTACCGCG CGGTGATGGA CAACGGGGTG GTGGAGAACG AGATGTGCCC GGTGTACCGG
GGCGTGATCG ACACCGAACC GGCGCCCAAC CCGGACGAGG TGGACGACGT CGAGTGGGTC
CCCTGGGCCG ACTTCGCGCC CGCCGTCCTC TCCGGAGCCC GGCCGATCTC GCCGTGGTGC
CTGCTGCAGG TGGAGGCGCT GGCCGAGCTG GGCGACGACC CGCTGAAGTG GCCCGTCGGC
TCCCCGGCCG ACCTGCCGCT CGCGGTGCGC TGA
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| Protein sequence | MERVVLLDET GAAVGEADKA TVHHEETPLH LAFSSYLFDR GGRLLLSRRA LHKKTWPGVW
TNSCCGHPAP GEDLEAGVRR RLAEELGLPD VGLDLVLPGF RYRAVMDNGV VENEMCPVYR
GVIDTEPAPN PDEVDDVEWV PWADFAPAVL SGARPISPWC LLQVEALAEL GDDPLKWPVG
SPADLPLAVR
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