Gene Amir_5290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5290 
Symbol 
ID8329492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6291107 
End bp6291490 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content73% 
IMG OID644945729 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003102957 
Protein GI256379297 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGACG GTCGGGCGAT CGGTTCGCGC GAGGCGCCGG AGTTCCGGGT GGACTGCCCG 
AGCAGGCCGA TCCTGGACCA GATCGCGGAC AAGTGGTCGA TGATGGCGCT CGCCGTGCTG
GAGGACGAAC CCCGCCGGTT CAACGACATC AAGCGCCGCC TGGAGGGCGT GACGCAGCGG
GTGCTCACGC ACACCCTGCG CCGGCTGGAG CGCAACGGGA TGGTGGAGCG GCGGGTGCTG
CCGACGTCTC CGGTGGGGGT GGAGTACGCG CTGACGCCGC TGGGGCGGTC GCTGCGGGAG
CCGTTCTGGC AGCTGCTGGA GTGGACGCTG GAGCACTCCG GGGAGGTCGA GCGCGCGCGG
CGGGCGTACG ACGGGGAGCG CTAG
 
Protein sequence
MGDGRAIGSR EAPEFRVDCP SRPILDQIAD KWSMMALAVL EDEPRRFNDI KRRLEGVTQR 
VLTHTLRRLE RNGMVERRVL PTSPVGVEYA LTPLGRSLRE PFWQLLEWTL EHSGEVERAR
RAYDGER