Gene Amir_5286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5286 
Symbol 
ID8329488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6285516 
End bp6286172 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID644945725 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_003102953 
Protein GI256379293 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.555118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGG AGCTGCTGCC GGACGGGGTC GCCGCGGTGG AGGCGTTCGG CGACCCGCCG 
GAGGCCGTGC TGCTGCCCGA GGAGGAGGAG CACGTGGCGC GCGCGGTGGA CAAGCGGCGC
CGCGAGTTCA CCACGGGCAG GCACTGCGCG CGCGGGGCGC TGGCGAAGCT GGGGTTCCCG
CCGGTGCCGC TGCTGCCCGG CCCGAAGCGG GAACCGGGGT GGCCGGAGGG CGTGGTCGGC
AGCATCACGC ACTGCAACGG GTACCGGGCG GCCGTCGCCG CGCGCACCGA GGCCGTGTGG
ACGCTGGGCA TCGACGCCGA GCCGAACCAG CCGACCCCGG AGGGCGTGCT GGCGGCGGTG
GCCCTCCCGC GCGAGCAGGA CATGGTGGCG CTGCTGGGGG GACGCGACTC GTCGGTGCAC
TGGGACCGGC TGCTGTTCAG CGCCAAGGAG TCGGTGTACA AGTCGTGGTT CCCGCTGACC
CGGCGGTGGC TGGGCTTCGA GGACGCCGAG CTGGTGCTCG GCCGCGACGG CACGTTCACC
GCGCGCGTGC TCGTGGAGCA CCCGGTCGTG GACGGGCGCG TGGTGTCCGG GTTCACCGGC
AGGTGGTTGG CGCGGGAGGG GTTTGTGGTG ACCGCGATCG CGGTACCCGC TCGCTGA
 
Protein sequence
MIEELLPDGV AAVEAFGDPP EAVLLPEEEE HVARAVDKRR REFTTGRHCA RGALAKLGFP 
PVPLLPGPKR EPGWPEGVVG SITHCNGYRA AVAARTEAVW TLGIDAEPNQ PTPEGVLAAV
ALPREQDMVA LLGGRDSSVH WDRLLFSAKE SVYKSWFPLT RRWLGFEDAE LVLGRDGTFT
ARVLVEHPVV DGRVVSGFTG RWLAREGFVV TAIAVPAR